Gene detail

Detailed information of g29228.t1 in Acropora digitifera

Genomic Location: chr14Alt:1618793...1621842
NR annotation: XP_029189858.2, 28S ribosomal protein S10, mitochondrial-like isoform X2 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5SPH9	Small ribosomal subunit protein uS10m OS=Danio rerio OX=7955 GN=mrps10 PE=3 SV=1
Q9VFB2	Small ribosomal subunit protein uS10m OS=Drosophila melanogaster OX=7227 GN=mRpS10 PE=2 SV=2
P82664	Small ribosomal subunit protein uS10m OS=Homo sapiens OX=9606 GN=MRPS10 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00338 all species →	Ribosomal_S10	Ribosomal protein S10p/S20e	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027486 all species →	Domain	Small ribosomal subunit protein uS10 domain	Interproscan
IPR036838 all species →	Homologous_superfamily	Small ribosomal subunit protein uS10 domain superfamily	Interproscan
IPR040055 all species →	Family	Small ribosomal subunit protein uS10m	Interproscan
IPR001848 all species →	Family	Small ribosomal subunit protein uS10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13334 all species →	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02946	RP-S10, MRPS10, rpsJ; small subunit ribosomal protein S10	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.