Detailed information of g29340.t1 in Acropora digitifera

Genomic Location: chr14Alt:2990507...2997635
NR annotation: XP_029203108.1, ribosomal RNA processing protein 36 homolog isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7SL20Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis OX=45351 GN=v1g245966 PE=3 SV=1
A6QNR1Ribosomal RNA processing protein 36 homolog OS=Bos taurus OX=9913 GN=RRP36 PE=2 SV=1
Q96EU6Ribosomal RNA processing protein 36 homolog OS=Homo sapiens OX=9606 GN=RRP36 PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06102
all species →		RRP36rRNA biogenesis protein RRP36FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009292
all species →		FamilyrRNA biogenesis protein RRP36Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21738
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000462
all species →		Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0030686
all species →		Cellular Component90S preribosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14795RRP36; ribosomal RNA-processing protein 36-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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