Gene detail

Detailed information of g2937.t2 in Acropora digitifera

Genomic Location: chr2Alt:6623968...6663123
NR annotation: XP_044163540.1, voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g2937.t2

ATGTTCCGGTGCTCCTTAACCTGTCTTACAGTATTTGAATATTTTATTTTGCTGGCGATTGGTGCCAACTGCATTGTATTGGCTTTGAGTACTCCACTGCCAAAAAACGACCGCACTGACTTGTCTGTGAAACTGGATAACTCTGAATATTACTTCGTTGGTATATTTTGTTTCGAAGCTCTCCTTAAAATAATGGCTTTCGGTTTTGTCCTTCATCCTGGTGCATATCTACGTAATGGCTGGAATATTCTGGACTTTGTCGTGATAGTCGTTGGCGTTATAAGTCTACCGGAAGTCAGTAGAATACTCGGTGAAGGGGACAAAGGACTGGATGTGAAAGCGCTTCGGGCCGTGAGGGTATTGCGGCCGTTAAAACTCATTTCTGGCATCCCTAGTTTACAAGTTGTAATGAAGTCCATTGTCCGTGCCATGGTACCTTTGCTGCAAATAGCACTTTTGGTTCTCTTTTGTATTCTCATTTATGCAATTATTGGCCTGGATTTCTTGAAAGATAAATTTCATTACTCGTGCTTTAACAATAAAACAAATGAACTTGAGTCAAATCCTCGTCCGTGTGATAAGAAGCCCTGGCCAGGAGTTCGTCAACTTTTCCACGGGAGAGAGTGCCAGAGTGGATACACATGCGGTGAACATTACTGGAAAGGTCCCAACGATGGCATTTCCACATTTGACAACATCGCTCTCGCTATGATAACAGTCTTCCAGTGCATAACAATGGAAGGATGGACGCAGATTATGTACTGGACATTTGATGCCATGGACGAAAACGGATACCTCTATGCCTGCTACTACGTGTCGCTTATCGTGATTGGCTCTTTCTTCGTTCTCAACCTTGTTCTTGGAGTTTTGAGTGGTGAGTTTGCTAAGGAGCGAGAGCGCGTTGACACAAGACGCAAGTTCTTCAAGGTTCGACGTCAGCAGCAACTGGATCGCCAGGTTCATGCTTATCAGTCTTGGATTGATAAGGCCGGTTCAACCGCTTTTCTTAGTCTCCTAAACCTGCTAAGAAGTAATTCACAATTATTCACTGATGCGCCGATTATTAACCTACTCCTCAAATGTAGTATTATGCACATGATAATAGCAACTTTACACGACTGCACTACTACAAGTAACATAGACCTTTTCAAAGATAGCCTTTTCCAGCGTTTTCTACAATGGAGGGCGAAGACATCCATCAAGGTTCGGGCACTGGTAAAGACCCAAGCCTTTTTTTGGACAGTTTTAACGTGTGTCTTTCTTAACACCATTGTCTTGGCTGTGGAGTACCACAATCAACCTGATTGGCTTACAGAGTTCCAGTATAACGCTGAAATTGTGTTTTTAACAATATTTTTTGTGGAGATGCTCCTAAAGCTTTACGGTCTAGGAATTCACCAGTACTTCTCTTCAAGTTTTAACATCTTTGATTTCGCTGTCGTATGTTGTGGTATTATCGACATGTTAATTGAGAAATACTCTCAAAAGATCAAGCTTGGCATCAGCGTGTTGAGGTGTGTTCGCCTTCTGAGGGTGTTCAAAGTAACCAGACATTGGCGATCACTGAGGAACCTCGCCACTTCTCTTGTGAGCAGCATCAAGTCAATCGTTAGCCTGATTTTCTTGTTGTTCCTGTTTATCCTGATTGCAGCTCTCCTTGGCATGCAGATTTTCGGCGGCAAATTCATCACAAATGACAAACCTCCTCCAAGCACTAATTTTGATAATTTTCAAAACGCAATGTTAGCCGTATTTCAGATTTTGACGGGCGAAGACTGGAACTCAGTTATGTACAGTGGTATTACAGCGCTTGGCGGCCCCCACAGTCGAGATGGAATTTTAGGCAGCTTGTATTTTATTCTCCTTGTTGTACTAGGAAACTATACTTTGCTCAACGTTTTCTTAGCCATCGCTGTGGATAACTTAGCGAACGCACAAATCTTGACAGAGGACGAAGAAAAAGAAAACGAGGAACGGAAACAGAAGAGAGAACTAAATAAACAAAGATATAGTCAAAAGCCAAACACAGGCTGGAGGAAGGCTGGCGCTAAGCTGCCGGTCGTAATGGCAATAAATCACTTTGTACGCAAGAAAAATGGCCAGGCTTCCACACCAGTTATTTCAGAGCAGACTACCTCTATTGGAAGAGAAAACGGAGAGGTCGTCGCTATGTCCACGTCTTTGAAAAGAAAAATCCAGTCCTATAGACGAGAGGCAAGTTACTATGATAAATCAGAAGACAGAAATGGCACAGAACTAGGTGAGCCCGCTGAAAACGCCGAGGCAACAGATGGAGATGGAAATATGATAAAGCGGAGAAGCAAGATAAGGAGAAGAAAGGCTGAAGGCAGTGGAGTCTCTGAGACAGAAGGCGAAGATGACGAAGAAGAAGAAAACCGTCCAATAACTCGCAAGAATATCATAAAAGTGCTGAAGAGTGGCCGACTTGGCAAAAGGAGACGTCGCTCGCGCAAATCCAAACCATTAATCAAAACTAGGACCATGTTTATCTTCAGCCCAGAAAATAGGTTTCGGCGATTATGCCATCGGATTGTAAATTTGCGTCACTTTGACAATTTCATGTTGGTGATAATTTTGCTCAGCAGTATCACAATCGCGATTGAAGATCCGTTGCACGATGTCTCCGAAAGAAACACGGTTCTATGGTATTTTGACTGTGTCTTCACAGCAATATTTGCTTTAGAAGTAGTAGTTAAGGCTGTGGACATAGGAATTATTCTTCATAAAGGAGCGTATTTTCGTGATTGGTGGAATGTCATTGATGCTTTGGTTGTAACTTTCAATATGGCCTCTCTAATATTACTTCGTACTGATTCTCCTCGCCAAGGCCAATCGGTGATCAGGTCTCTCCGAGTTTTTCGAGTCCTCAGACCCTTCAAGGGCGTGCATAAAATCAAGAAATTGCAGGCGGTGTTCCGTTGCATGTGGTACTCGGTGAAGAATGTCGCTAATATCCTCATGATCACGGTGCTTTTCCTGTTTATTTTTGCTGTCATGGGTGTGCAACTGTTCAGTGGAAAGTTTCAAGGCTGCAGCGACCCGTCAAAGTTATACAAAGAACAGTGCAAGGGCCAATTCTTCACTTTCAAGTTGGCTAAAGATAGTCAACAGCTTGTAATTAACGAGGTGAAGAACCGCACTTGGTCAACAAGACCCCTCAATTTTGACAATGTTGCCATCGCGATGTTGACGCTTTATACCTCTTCCACTGGTGAAGGATGGCCCAGTAATATGCAAAGAACTATGGCCACAGGACCCCCAAACCAGGGTCCAATCGACAACAACAGCCCCGGTTACGCTATTTATTACATGAGCTTTGTTGTAGTTTTTTCTTTTTTTTTTCTCAACATCTTTGTGGCTCTGATCATTCTCACATTCCAGGAGCAAGGCGAAAGAGAGATAGCTAGCTGTGAGTTGGACAGGAATCAGCGCGACTGCATTCAATTTGCACTAACAGCAAAACCAACCCAGCGGTACATGCCTGCTGACCACAAGAGCCTGCAGTACAAGATATGGACCCTGGTGATGTCTAAAAGATTTGATGCAGTAATCTTAGTACTGATTGCGCTCAATACTGGCGTCTTGATAACTCAGCATTATAAGCAGCCTGAATATTTTCAAGATATTGTCATGTACCTCAACATTGGTTTTACTGTCCTCTACATGATCGAGGCGGGATTAAAGTTCTTTGCTCTAAGACTGAAATATTTTCGGGACTACTGGAATGTTTTTGATTTCATCGTCGTGTTGGGAGGCTTGTTGGATGTCATATTAAATGTTATTGTCAAAGTATCGAAAACGAATGACATCCTTACCTTCATTGATCCTACGATGTTTCGCCTCTTTCGAGCGGCAAGGCTCATCAAACTTCTACGGCGCGGCTACACCATAAGAATTCTTCTATGGACATTTCTCCAATCATTTAAGGCGCTTCCTTACGTCACACTTCTCATTATGTTGATGTTTTTCATGTACGCGGTCATTGGAATGCAGCTCTTTGGTAAAATAAAGCTTGATCCAGATTCACAAATTAACGAAGATAATCACTTTAGAAATCTCTTACAAGCACTTCAGGTTCTCTTCAGATCGGCGACCGGAGAGGACTGGCACAACATCATGCTGGCTTGCTGGGATGAGGCGCCGTGTGATGAATCTATTGCAAAAGGCGCAGATAGCCCGCAGACCTGTGGATCCACAGTTGGAGCTGTGTTGTATTTCTGTTCCTTTATATTTCTCTCCATGTTTTTGATGTTAAATCTTTTTGTGGCTGTCATCATGGACAACTTTGAATATCTCACTCGTGATGAGTCTATTCTTGGCCCTCATCACCTTGATGAGTTCGTGCGAGTGTGGTCTGAGTTTGACCCTGGCGCGAGTGGACTTATTCACCACAGTGAAATCTACAAGGTCATGTGTAGCATGTCACCTCCTGTTGGCTTTGGGAAGAAATGCCCAAGAATTGTGGGTTACAAGCGCCTTATCAAAATGAACATGCCGCTGAACGATGATGGCACCGTCTCATTTAGCACTACTCTCTTTGCTCTTATCCGTACCTCCCTCAACATCAAACTCCGAGGAAACATGAACGCTAATGACACCGAGCTGCGGAAAATGATAAAGCGAGTTTGGCCGAAGACATCGGAAAAAGTACTCAACAAATTGATTCCAAAACAATCTGTGCTAAGCTGCCATCAGATGACAATAGGGAAGATTTACTGTGCAAAACTTATACACGAGAATTACAAGTATTTAAGAAGAAAAAGCACACCAGCCGAGAGGACCGAAAGGGAAGAAGAAAGGAGCCATAGATATGCCAAGGGAGGCCTCTTTTCCAAGTTGGTAGGATCACTTCGTGGCAAAAACAGGAATGGGAGGGAGGACATAGAAATGGCCCGCGTAGGGGCTGGAAGGAACAGAGCATTTACCAGTGACGCCAGACTAAACTTGGGACGCGATTTTTTTTATTCGCTTAATCGAAAGAGCTTTCGAAATGATAAACAATGGTATTTATTTAATTGTGACAGCACTCTTGGTTGCCGAATATTTTGGCATCCTTCTGGTGAAGAATTGACGAAAATCGAGAAAACGATTATTCAGTTCGAGTTTCTTGATATGGGATTCCACTTTAAGTTTTATATATCTCTTTCTTTCTTCAATGTTATTTGTTCTTTTTTTATGTGCAAGCCGCTAGTTTTTGGTTATTCCTGA

Transcript

chr2Alt.g2937.t2

GGACATCTTTGTTAGGTCTGTAAAATATCTCTCTATGTTCCGGTGCTCCTTAACCTGTCTTACAGTATTTGAATATTTTATTTTGCTGGCGATTGGTGCCAACTGCATTGTATTGGCTTTGAGTACTCCACTGCCAAAAAACGACCGCACTGACTTGTCTGTGAAACTGGATAACTCTGAATATTACTTCGTTGGTATATTTTGTTTCGAAGCTCTCCTTAAAATAATGGCTTTCGGTTTTGTCCTTCATCCTGGTGCATATCTACGTAATGGCTGGAATATTCTGGACTTTGTCGTGATAGTCGTTGGCGTTATAAGTCTACCGGAAGTCAGTAGAATACTCGGTGAAGGGGACAAAGGACTGGATGTGAAAGCGCTTCGGGCCGTGAGGGTATTGCGGCCGTTAAAACTCATTTCTGGCATCCCTAGTTTACAAGTTGTAATGAAGTCCATTGTCCGTGCCATGGTACCTTTGCTGCAAATAGCACTTTTGGTTCTCTTTTGTATTCTCATTTATGCAATTATTGGCCTGGATTTCTTGAAAGATAAATTTCATTACTCGTGCTTTAACAATAAAACAAATGAACTTGAGTCAAATCCTCGTCCGTGTGATAAGAAGCCCTGGCCAGGAGTTCGTCAACTTTTCCACGGGAGAGAGTGCCAGAGTGGATACACATGCGGTGAACATTACTGGAAAGGTCCCAACGATGGCATTTCCACATTTGACAACATCGCTCTCGCTATGATAACAGTCTTCCAGTGCATAACAATGGAAGGATGGACGCAGATTATGTACTGGACATTTGATGCCATGGACGAAAACGGATACCTCTATGCCTGCTACTACGTGTCGCTTATCGTGATTGGCTCTTTCTTCGTTCTCAACCTTGTTCTTGGAGTTTTGAGTGGTGAGTTTGCTAAGGAGCGAGAGCGCGTTGACACAAGACGCAAGTTCTTCAAGGTTCGACGTCAGCAGCAACTGGATCGCCAGGTTCATGCTTATCAGTCTTGGATTGATAAGGCCGGTTCAACCGCTTTTCTTAGTCTCCTAAACCTGCTAAGAAGTAATTCACAATTATTCACTGATGCGCCGATTATTAACCTACTCCTCAAATGTAGTATTATGCACATGATAATAGCAACTTTACACGACTGCACTACTACAAGTAACATAGACCTTTTCAAAGATAGCCTTTTCCAGCGTTTTCTACAATGGAGGGCGAAGACATCCATCAAGGTTCGGGCACTGGTAAAGACCCAAGCCTTTTTTTGGACAGTTTTAACGTGTGTCTTTCTTAACACCATTGTCTTGGCTGTGGAGTACCACAATCAACCTGATTGGCTTACAGAGTTCCAGTATAACGCTGAAATTGTGTTTTTAACAATATTTTTTGTGGAGATGCTCCTAAAGCTTTACGGTCTAGGAATTCACCAGTACTTCTCTTCAAGTTTTAACATCTTTGATTTCGCTGTCGTATGTTGTGGTATTATCGACATGTTAATTGAGAAATACTCTCAAAAGATCAAGCTTGGCATCAGCGTGTTGAGGTGTGTTCGCCTTCTGAGGGTGTTCAAAGTAACCAGACATTGGCGATCACTGAGGAACCTCGCCACTTCTCTTGTGAGCAGCATCAAGTCAATCGTTAGCCTGATTTTCTTGTTGTTCCTGTTTATCCTGATTGCAGCTCTCCTTGGCATGCAGATTTTCGGCGGCAAATTCATCACAAATGACAAACCTCCTCCAAGCACTAATTTTGATAATTTTCAAAACGCAATGTTAGCCGTATTTCAGATTTTGACGGGCGAAGACTGGAACTCAGTTATGTACAGTGGTATTACAGCGCTTGGCGGCCCCCACAGTCGAGATGGAATTTTAGGCAGCTTGTATTTTATTCTCCTTGTTGTACTAGGAAACTATACTTTGCTCAACGTTTTCTTAGCCATCGCTGTGGATAACTTAGCGAACGCACAAATCTTGACAGAGGACGAAGAAAAAGAAAACGAGGAACGGAAACAGAAGAGAGAACTAAATAAACAAAGATATAGTCAAAAGCCAAACACAGGCTGGAGGAAGGCTGGCGCTAAGCTGCCGGTCGTAATGGCAATAAATCACTTTGTACGCAAGAAAAATGGCCAGGCTTCCACACCAGTTATTTCAGAGCAGACTACCTCTATTGGAAGAGAAAACGGAGAGGTCGTCGCTATGTCCACGTCTTTGAAAAGAAAAATCCAGTCCTATAGACGAGAGGCAAGTTACTATGATAAATCAGAAGACAGAAATGGCACAGAACTAGGTGAGCCCGCTGAAAACGCCGAGGCAACAGATGGAGATGGAAATATGATAAAGCGGAGAAGCAAGATAAGGAGAAGAAAGGCTGAAGGCAGTGGAGTCTCTGAGACAGAAGGCGAAGATGACGAAGAAGAAGAAAACCGTCCAATAACTCGCAAGAATATCATAAAAGTGCTGAAGAGTGGCCGACTTGGCAAAAGGAGACGTCGCTCGCGCAAATCCAAACCATTAATCAAAACTAGGACCATGTTTATCTTCAGCCCAGAAAATAGGTTTCGGCGATTATGCCATCGGATTGTAAATTTGCGTCACTTTGACAATTTCATGTTGGTGATAATTTTGCTCAGCAGTATCACAATCGCGATTGAAGATCCGTTGCACGATGTCTCCGAAAGAAACACGGTTCTATGGTATTTTGACTGTGTCTTCACAGCAATATTTGCTTTAGAAGTAGTAGTTAAGGCTGTGGACATAGGAATTATTCTTCATAAAGGAGCGTATTTTCGTGATTGGTGGAATGTCATTGATGCTTTGGTTGTAACTTTCAATATGGCCTCTCTAATATTACTTCGTACTGATTCTCCTCGCCAAGGCCAATCGGTGATCAGGTCTCTCCGAGTTTTTCGAGTCCTCAGACCCTTCAAGGGCGTGCATAAAATCAAGAAATTGCAGGCGGTGTTCCGTTGCATGTGGTACTCGGTGAAGAATGTCGCTAATATCCTCATGATCACGGTGCTTTTCCTGTTTATTTTTGCTGTCATGGGTGTGCAACTGTTCAGTGGAAAGTTTCAAGGCTGCAGCGACCCGTCAAAGTTATACAAAGAACAGTGCAAGGGCCAATTCTTCACTTTCAAGTTGGCTAAAGATAGTCAACAGCTTGTAATTAACGAGGTGAAGAACCGCACTTGGTCAACAAGACCCCTCAATTTTGACAATGTTGCCATCGCGATGTTGACGCTTTATACCTCTTCCACTGGTGAAGGATGGCCCAGTAATATGCAAAGAACTATGGCCACAGGACCCCCAAACCAGGGTCCAATCGACAACAACAGCCCCGGTTACGCTATTTATTACATGAGCTTTGTTGTAGTTTTTTCTTTTTTTTTTCTCAACATCTTTGTGGCTCTGATCATTCTCACATTCCAGGAGCAAGGCGAAAGAGAGATAGCTAGCTGTGAGTTGGACAGGAATCAGCGCGACTGCATTCAATTTGCACTAACAGCAAAACCAACCCAGCGGTACATGCCTGCTGACCACAAGAGCCTGCAGTACAAGATATGGACCCTGGTGATGTCTAAAAGATTTGATGCAGTAATCTTAGTACTGATTGCGCTCAATACTGGCGTCTTGATAACTCAGCATTATAAGCAGCCTGAATATTTTCAAGATATTGTCATGTACCTCAACATTGGTTTTACTGTCCTCTACATGATCGAGGCGGGATTAAAGTTCTTTGCTCTAAGACTGAAATATTTTCGGGACTACTGGAATGTTTTTGATTTCATCGTCGTGTTGGGAGGCTTGTTGGATGTCATATTAAATGTTATTGTCAAAGTATCGAAAACGAATGACATCCTTACCTTCATTGATCCTACGATGTTTCGCCTCTTTCGAGCGGCAAGGCTCATCAAACTTCTACGGCGCGGCTACACCATAAGAATTCTTCTATGGACATTTCTCCAATCATTTAAGGCGCTTCCTTACGTCACACTTCTCATTATGTTGATGTTTTTCATGTACGCGGTCATTGGAATGCAGCTCTTTGGTAAAATAAAGCTTGATCCAGATTCACAAATTAACGAAGATAATCACTTTAGAAATCTCTTACAAGCACTTCAGGTTCTCTTCAGATCGGCGACCGGAGAGGACTGGCACAACATCATGCTGGCTTGCTGGGATGAGGCGCCGTGTGATGAATCTATTGCAAAAGGCGCAGATAGCCCGCAGACCTGTGGATCCACAGTTGGAGCTGTGTTGTATTTCTGTTCCTTTATATTTCTCTCCATGTTTTTGATGTTAAATCTTTTTGTGGCTGTCATCATGGACAACTTTGAATATCTCACTCGTGATGAGTCTATTCTTGGCCCTCATCACCTTGATGAGTTCGTGCGAGTGTGGTCTGAGTTTGACCCTGGCGCGAGTGGACTTATTCACCACAGTGAAATCTACAAGGTCATGTGTAGCATGTCACCTCCTGTTGGCTTTGGGAAGAAATGCCCAAGAATTGTGGGTTACAAGCGCCTTATCAAAATGAACATGCCGCTGAACGATGATGGCACCGTCTCATTTAGCACTACTCTCTTTGCTCTTATCCGTACCTCCCTCAACATCAAACTCCGAGGAAACATGAACGCTAATGACACCGAGCTGCGGAAAATGATAAAGCGAGTTTGGCCGAAGACATCGGAAAAAGTACTCAACAAATTGATTCCAAAACAATCTGTGCTAAGCTGCCATCAGATGACAATAGGGAAGATTTACTGTGCAAAACTTATACACGAGAATTACAAGTATTTAAGAAGAAAAAGCACACCAGCCGAGAGGACCGAAAGGGAAGAAGAAAGGAGCCATAGATATGCCAAGGGAGGCCTCTTTTCCAAGTTGGTAGGATCACTTCGTGGCAAAAACAGGAATGGGAGGGAGGACATAGAAATGGCCCGCGTAGGGGCTGGAAGGAACAGAGCATTTACCAGTGACGCCAGACTAAACTTGGGACGCGATTTTTTTTATTCGCTTAATCGAAAGAGCTTTCGAAATGATAAACAATGGTATTTATTTAATTGTGACAGCACTCTTGGTTGCCGAATATTTTGGCATCCTTCTGGTGAAGAATTGACGAAAATCGAGAAAACGATTATTCAGTTCGAGTTTCTTGATATGGGATTCCACTTTAAGTTTTATATATCTCTTTCTTTCTTCAATGTTATTTGTTCTTTTTTTATGTGCAAGCCGCTAGTTTTTGGTTATTCCTGAAAAAGCACTTGCTAAAGAAAAAATGGTCCTTATTGGTAGAGTGTTAATTTGAAACTGCGACATCAAAATTGCAAATGATCTCCATTCTTCTGCGAGATCCGAATCTTGTCCCCAAATGAAATAAGATAAACGCTGAATGACCAAAAACCCAATGGGATAGTGCCGCCTATAATAAATTTCCTCTAAGCTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
C9D7C2	Voltage-dependent calcium channel type A subunit alpha-1 OS=Apis mellifera OX=7460 GN=CAC PE=2 SV=1
Q02343	Voltage-dependent R-type calcium channel subunit alpha-1E OS=Oryctolagus cuniculus OX=9986 GN=CACNA1E PE=2 SV=1
Q07652	Voltage-dependent R-type calcium channel subunit alpha-1E OS=Rattus norvegicus OX=10116 GN=Cacna1e PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan
PF08763 all species →	Ca_chan_IQ	Voltage gated calcium channel IQ domain	Domain	Interproscan
PF16905 all species →	GPHH	Voltage-dependent L-type calcium channel, IQ-associated	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027359 all species →	Homologous_superfamily	Voltage-dependent channel domain superfamily	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR002077 all species →	Family	Voltage-dependent calcium channel, alpha-1 subunit	Interproscan
IPR014873 all species →	Domain	Voltage-dependent calcium channel, alpha-1 subunit, IQ domain	Interproscan
IPR050599 all species →	Family	Voltage-dependent calcium channel alpha-1 subunit	Interproscan
IPR031649 all species →	Domain	Voltage-dependent L-type calcium channel, IQ-associated domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45628 all species →	VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005245 all species →	Molecular Function	voltage-gated calcium channel activity	Interproscan
GO:0005891 all species →	Cellular Component	voltage-gated calcium channel complex	Interproscan
GO:0070588 all species →	Biological Process	calcium ion transmembrane transport	Interproscan
GO:0008331 all species →	Molecular Function	high voltage-gated calcium channel activity	Interproscan
GO:0098703 all species →	Biological Process	calcium ion import across plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04851	CACNA1D, CAV1.3; voltage-dependent calcium channel L type alpha-1D	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of g2937.t2 across 39 RNA-seq samples of Acropora digitifera. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

39Samples

0TPM > 0

1Conditions

0.0Max TPM

0.0Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
Coral branch	39	0	0.00	0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study
SRR23047206	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047207	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047208	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047209	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047210	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047211	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047212	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047213	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047214	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047215	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047216	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047217	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047218	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047219	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047220	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047221	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047222	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047223	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047224	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047225	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047226	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047227	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047228	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047229	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047230	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047231	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047232	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047233	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047234	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047235	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047236	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047237	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047238	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047239	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047240	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047241	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047242	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047243	Coral branch	Coral branch	adult	not recorded	SRP416931
SRR23047244	Coral branch	Coral branch	adult	not recorded	SRP416931

Source: CnidoSite RNA-seq expression matrices (ADIGI_TPM, StringTie quantification over 39 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.