Detailed information of g29387.t1.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_015749003.1, PREDICTED: protein SMG9-like [Acropora digitifera]
Species abbreviation AMYRI · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q05AW9Nonsense-mediated mRNA decay factor SMG9 OS=Xenopus laevis OX=8355 GN=smg9 PE=2 SV=1
B5DDX6Nonsense-mediated mRNA decay factor SMG9 OS=Xenopus tropicalis OX=8364 GN=smg9 PE=2 SV=1
B5X165Nonsense-mediated mRNA decay factor SMG9 OS=Salmo salar OX=8030 GN=smg9 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005654 (this species only)

 Pfam domain
No Pfam domain signature was detected for g29387.t1.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR039177
all species →		FamilyNonsense-mediated mRNA decay factor SMG9Interproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14270
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000184
all species →		Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g29387.t1.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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