Detailed information of g294.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_259782298.1, 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Aestuariispira ectoiniformans]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O34331Putative rRNA methyltransferase YlbH OS=Bacillus subtilis (strain 168) OX=224308 GN=ylbH PE=3 SV=2
I6XFS7RNA/DNA methyltransferase Rv2966c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2966c PE=1 SV=1
Q61824Disintegrin and metalloproteinase domain-containing protein 12 OS=Mus musculus OX=10090 GN=Adam12 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03602Cons_hypoth95Conserved hypothetical protein 95FamilyInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF13733Glyco_transf_7NN-terminal region of glycosyl transferase group 7DomainInterproscan
PF00528BPD_transp_1Binding-protein-dependent transport system inner membrane componentFamilyInterproscan
PF01424R3HR3H domainDomainInterproscan
PF00177Ribosomal_S7Ribosomal protein S7p/S5eDomainInterproscan
PF13912zf-C2H2_6C2H2-type zinc fingerDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF03351DOMONDOMON domainDomainInterproscan
PF01421ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF00652Ricin_B_lectinRicin-type beta-trefoil lectin domainDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF00433Pkinase_CProtein kinase C terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004398FamilyRNA methyltransferase, RsmDInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR052510FamilyOomycete RxLR EffectorInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR027995DomainGalactosyltransferase, N-terminalInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR003859FamilyBeta-1,4-galactosyltransferaseInterproscan
IPR035906Homologous_superfamilyMetI-like superfamilyInterproscan
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan
IPR036867Homologous_superfamilyR3H domain superfamilyInterproscan
IPR001374DomainR3H domainInterproscan
IPR036823Homologous_superfamilySmall ribosomal subunit protein uS7 domain superfamilyInterproscan
IPR005717FamilySmall ribosomal subunit protein uS7, bacterial/organellar-typeInterproscan
IPR023798DomainSmall ribosomal subunit protein uS7 domainInterproscan
IPR000235FamilySmall ribosomal subunit protein uS7Interproscan
IPR020606Conserved_siteSmall ribosomal subunit protein uS7, conserved siteInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR000945FamilyDopamine beta-hydroxylase-likeInterproscan
IPR045266DomainCopper-dependent monooxygenases, DOMON domainInterproscan
IPR005018DomainDOMON domainInterproscan
IPR000859DomainCUB domainInterproscan
IPR000772DomainRicin B, lectin domainInterproscan
IPR035992Homologous_superfamilyRicin B-like lectinsInterproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR036436Homologous_superfamilyDisintegrin domain superfamilyInterproscan
IPR001762DomainDisintegrin domainInterproscan
IPR000961DomainAGC-kinase, C-terminalInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017892DomainProtein kinase, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43542METHYLTRANSFERASEInterproscan
PTHR45895INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR19300BETA-1,4-GALACTOSYLTRANSFERASEInterproscan
PTHR42929INNER MEMBRANE ABC TRANSPORTER PERMEASE PROTEIN YDCU-RELATED-RELATEDInterproscan
PTHR11205RIBOSOMAL PROTEIN S7Interproscan
PTHR24393ZINC FINGER PROTEINInterproscan
PTHR10157DOPAMINE BETA HYDROXYLASE RELATEDInterproscan
PTHR11905ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAINInterproscan
PTHR24351RIBOSOMAL PROTEIN S6 KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0031167Biological ProcessrRNA methylationInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0008378Molecular Functiongalactosyltransferase activityInterproscan
GO:0016757Molecular Functionglycosyltransferase activityInterproscan
GO:0070085Biological ProcessglycosylationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0015935Cellular Componentsmall ribosomal subunitInterproscan
GO:0000028Biological Processribosomal small subunit assemblyInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004500Molecular Functiondopamine beta-monooxygenase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0018105Biological Processpeptidyl-serine phosphorylationInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02992RP-S7, MRPS7, rpsG; small subunit ribosomal protein S7-Transportersko02000deepkoala
Ribosomeko03011deepkoala

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