Detailed information of g296.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_034514296.1, POC1 centriolar protein homolog A isoform X1 [Ailuropoda melanoleuca]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q28I85POC1 centriolar protein homolog A OS=Xenopus tropicalis OX=8364 GN=poc1a PE=2 SV=1
Q2TBP4POC1 centriolar protein homolog A OS=Bos taurus OX=9913 GN=POC1A PE=2 SV=1
Q8NBT0POC1 centriolar protein homolog A OS=Homo sapiens OX=9606 GN=POC1A PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13606Ank_3Ankyrin repeatRepeatInterproscan
PF00338Ribosomal_S10Ribosomal protein S10p/S20eDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF01432Peptidase_M3Peptidase family M3FamilyInterproscan
PF08439Peptidase_M3_NOligopeptidase FFamilyInterproscan
PF00431CUBCUB domainDomainInterproscan
PF01421ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110RepeatAnkyrin repeatInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR018268Conserved_siteSmall ribosomal subunit protein uS10, conserved siteInterproscan
IPR001848FamilySmall ribosomal subunit protein uS10Interproscan
IPR027486DomainSmall ribosomal subunit protein uS10 domainInterproscan
IPR036838Homologous_superfamilySmall ribosomal subunit protein uS10 domain superfamilyInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050505FamilyWD repeat-containing protein WDR55/POC1Interproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR047876FamilySHKBP1/KCTD3Interproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR011977FamilyPeptidase M3B, oligoendopeptidase-related clade 3Interproscan
IPR001567DomainPeptidase M3A/M3B catalytic domainInterproscan
IPR045090FamilyPeptidase M3A/M3BInterproscan
IPR013647DomainOligopeptidase F, N-terminal domainInterproscan
IPR042088Homologous_superfamilyOligoendopeptidase F, C-terminal domainInterproscan
IPR000772DomainRicin B, lectin domainInterproscan
IPR000859DomainCUB domainInterproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR035992Homologous_superfamilyRicin B-like lectinsInterproscan
IPR052129FamilySpermadhesin-Link domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48051-Interproscan
PTHR1170030S RIBOSOMAL PROTEIN S10 FAMILY MEMBERInterproscan
PTHR18905NINEINInterproscan
PTHR44019WD REPEAT-CONTAINING PROTEIN 55Interproscan
PTHR15859SETA BINDING PROTEIN 1Interproscan
PTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGInterproscan
PTHR11804PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATEDInterproscan
PTHR46908CUBILIN-LIKE PROTEINInterproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0015935Cellular Componentsmall ribosomal subunitInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0034454Biological Processmicrotubule anchoring at centrosomeInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0006518Biological Processpeptide metabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02946RP-S10, MRPS10, rpsJ; small subunit ribosomal protein S10-Cilium and associated proteinsko03037deepkoala
Peptidases and inhibitorsko01002deepkoala
Ribosomeko03011deepkoala

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