Detailed information of g29604.t2.1 in Montipora cactus

Genomic Location: :...
NR annotation: CAH3029386.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q91WM3U3 small nucleolar RNA-interacting protein 2 OS=Mus musculus OX=10090 GN=Rrp9 PE=1 SV=1
O43818U3 small nucleolar RNA-interacting protein 2 OS=Homo sapiens OX=9606 GN=RRP9 PE=1 SV=1
Q75LV5U3 snoRNP-associated protein-like YAOH OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0625900 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20049DUF6451Domain of unknown function (DUF6451)DomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR045609DomainDomain of unknown function DUF6451Interproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR039241FamilyRibosomal RNA-processing protein Rrp9-likeInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19865U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034511Molecular FunctionU3 snoRNA bindingInterproscan

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