Detailed information of g297.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_027046486.1, uncharacterized protein LOC113674212 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9KU93Peptidoglycan DD-endopeptidase ShyC OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=shyC PE=1 SV=1
E0N688DD-carboxypeptidase/endopeptidase Mpg OS=Neisseria meningitidis serogroup B (strain ATCC 13091 / M2091) OX=862513 GN=HMPREF0602_0018 PE=1 SV=1
Q9K163DD-carboxypeptidase/endopeptidase Mpg OS=Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58) OX=122586 GN=NMB0315 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14988DUF4515Domain of unknown function (DUF4515)FamilyInterproscan
PF12612TFCD_CTubulin folding cofactor D C terminalFamilyInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF00573Ribosomal_L4Ribosomal protein L4/L1 familyFamilyInterproscan
PF01551Peptidase_M23Peptidase family M23FamilyInterproscan
PF09762CCDC93_CCCCDC93 coiled-coil domainCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032777DomainDomain of unknown function DUF4515Interproscan
IPR033162FamilyTubulin-folding cofactor DInterproscan
IPR022577DomainTubulin-specific chaperone D, C-terminalInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052055FamilyHepadnavirus polymerase/reverse transcriptaseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR013005FamilyLarge ribosomal subunit protein uL4-likeInterproscan
IPR002136FamilyLarge ribosomal subunit protein uL4Interproscan
IPR023574Homologous_superfamilyLarge ribosomal subunit protein uL4 domain superfamilyInterproscan
IPR011055Homologous_superfamilyDuplicated hybrid motifInterproscan
IPR016047DomainPeptidase M23Interproscan
IPR050570FamilyBacterial cell wall metabolism enzymeInterproscan
IPR019159DomainCCDC93, coiled-coil domainInterproscan
IPR039116FamilyCoiled-coil domain-containing protein 93Interproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR052873FamilyHEAT repeat-containing protein 9Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14845COILED-COIL DOMAIN-CONTAINING 166Interproscan
PTHR12658BETA-TUBULIN COFACTOR DInterproscan
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR33050REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR1074650S RIBOSOMAL PROTEIN L4Interproscan
PTHR21666PEPTIDASE-RELATEDInterproscan
PTHR16441FIDIPIDINEInterproscan
PTHR38323PROTEIN HEATR9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0007021Biological Processtubulin complex assemblyInterproscan
GO:0007023Biological Processpost-chaperonin tubulin folding pathwayInterproscan
GO:0016328Cellular Componentlateral plasma membraneInterproscan
GO:0034333Biological Processadherens junction assemblyInterproscan
GO:0048487Molecular Functionbeta-tubulin bindingInterproscan
GO:0070830Biological Processbicellular tight junction assemblyInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0000920Biological Processseptum digestion after cytokinesisInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006893Biological ProcessGolgi to plasma membrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02926RP-L4, MRPL4, rplD; large subunit ribosomal protein L4-Peptidoglycan biosynthesis and degradation proteinsko01011deepkoala
Ribosomeko03011deepkoala

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