Detailed information of g29747.t1 in Montipora capitata

Genomic Location: xfSc0000707:262...8006
NR annotation: XP_044173798.1, telomerase-binding protein EST1A-like [Acropora millepora]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P61406Telomerase-binding protein EST1A OS=Mus musculus OX=10090 GN=Smg6 PE=1 SV=1
Q86US8Telomerase-binding protein EST1A OS=Homo sapiens OX=9606 GN=SMG6 PE=1 SV=2
A0A0R4IZ84Telomerase-binding protein EST1A OS=Danio rerio OX=7955 GN=smg6 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003717 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10373
all species →
EST1_DNA_bindEst1 DNA/RNA binding domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018834
all species →
DomainDNA/RNA-binding domain, Est1-typeInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR045153
all species →
FamilyEst1/Ebs1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15696
all species →
SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000184
all species →
Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0005697
all species →
Cellular Componenttelomerase holoenzyme complexInterproscan
GO:0042162
all species →
Molecular Functiontelomeric DNA bindingInterproscan
GO:0070034
all species →
Molecular Functiontelomerase RNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g29747.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP