Detailed information of g2978.t1 in Acropora digitifera

Genomic Location: chr2Alt:7157212...7168813
NR annotation: XP_044177666.1, zinc finger CCCH-type with G patch domain-containing protein-like isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7SBN6Zinc finger CCCH-type with G patch domain-containing protein OS=Nematostella vectensis OX=45351 GN=v1g244155 PE=3 SV=1
Q7SXW2Zinc finger CCCH-type with G patch domain-containing protein OS=Danio rerio OX=7955 GN=zgpat PE=2 SV=1
Q5PPF5Zinc finger CCCH-type with G patch domain-containing protein OS=Rattus norvegicus OX=10116 GN=Zgpat PE=2 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01585
all species →		G-patchG-patch domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000467
all species →		DomainG-patch domainInterproscan
IPR002999
all species →		DomainTudor domainInterproscan
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46297
all species →		ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0001227
all species →		Molecular FunctionDNA-binding transcription repressor activity, RNA polymerase II-specificInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g2978.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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