Detailed information of g299.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047145713.1, nodal modulator 1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P69849BOS complex subunit NOMO3 OS=Homo sapiens OX=9606 GN=NOMO3 PE=1 SV=2
Q5JPE7BOS complex subunit NOMO2 OS=Homo sapiens OX=9606 GN=NOMO2 PE=1 SV=1
Q15155BOS complex subunit NOMO1 OS=Homo sapiens OX=9606 GN=NOMO1 PE=1 SV=5
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00531DeathDeath domainDomainInterproscan
PF04406TP6A_NType IIB DNA topoisomeraseDomainInterproscan
PF21180TOP6A-Spo11_ToprimTopoisomerase 6 subunit A/Spo11, Toprim domainDomainInterproscan
PF13620CarboxypepD_regCarboxypeptidase regulatory-like domainDomainInterproscan
PF19433NDNF_CNeuron-derived Neurotrophic Factor C-terminalDomainInterproscan
PF01494FAD_binding_3FAD binding domainFamilyInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00793DAHP_synth_1DAHP synthetase I familyDomainInterproscan
PF00347Ribosomal_L6Ribosomal protein L6DomainInterproscan
PF00252Ribosomal_L16Ribosomal protein L16p/L10eDomainInterproscan
PF00238Ribosomal_L14Ribosomal protein L14p/L23eDomainInterproscan
PF00673Ribosomal_L5_Cribosomal L5P family C-terminusDomainInterproscan
PF00281Ribosomal_L5Ribosomal protein L5DomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000488DomainDeath domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR002815FamilySpo11/DNA topoisomerase VI subunit AInterproscan
IPR013049DomainSpo11/DNA topoisomerase VI, subunit A, N-terminalInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036078Homologous_superfamilySpo11/DNA topoisomerase VI subunit A superfamilyInterproscan
IPR034136DomainTopoisomerase 6 subunit A/Spo11, TOPRIM domainInterproscan
IPR013784Homologous_superfamilyCarbohydrate-binding-like foldInterproscan
IPR051417FamilySerine-Aspartate Repeat-ContainingInterproscan
IPR008969Homologous_superfamilyCarboxypeptidase-like, regulatory domain superfamilyInterproscan
IPR019326FamilyProtein NDNFInterproscan
IPR045805DomainProtein NDNF, C-terminalInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR051205FamilyUbiquinone biosynthesis monooxygenase UbiH/COQ6Interproscan
IPR018168Conserved_siteUbiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved siteInterproscan
IPR010971FamilyUbiquinone biosynthesis hydroxylase UbiH/COQ6Interproscan
IPR002938DomainFAD-binding domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR006269Family3-deoxy-8-phosphooctulonate synthaseInterproscan
IPR006218DomainDAHP synthetase I/KDSAInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR016180DomainLarge ribosomal subunit protein uL16 domainInterproscan
IPR036789Homologous_superfamilyLarge ribosomal subunit protein uL6-like, alpha-beta domain superfamilyInterproscan
IPR036853Homologous_superfamilyLarge ribosomal subunit protein uL14 superfamilyInterproscan
IPR020040DomainLarge ribosomal subunit protein uL6, alpha-beta domainInterproscan
IPR000114FamilyLarge ribosomal subunit protein uL16, bacterial-typeInterproscan
IPR005745FamilyLarge ribosomal subunit protein uL14, bacterial-typeInterproscan
IPR002358Conserved_siteLarge ribosomal subunit protein uL6, conserved siteInterproscan
IPR022803Homologous_superfamilyLarge ribosomal subunit protein uL5 domain superfamilyInterproscan
IPR047873FamilyLarge ribosomal subunit protein uL16Interproscan
IPR000218FamilyLarge ribosomal subunit protein uL14Interproscan
IPR031309DomainLarge ribosomal subunit protein uL5, C-terminalInterproscan
IPR020798Conserved_siteLarge ribosomal subunit protein uL16, conserved siteInterproscan
IPR020930FamilyLarge ribosomal subunit protein uL5, bacterial-typeInterproscan
IPR020929Conserved_siteLarge ribosomal subunit protein uL5, conserved siteInterproscan
IPR036920Homologous_superfamilyLarge ribosomal subunit protein uL16 superfamilyInterproscan
IPR031310DomainLarge ribosomal subunit protein uL5, N-terminalInterproscan
IPR019972Conserved_siteLarge ribosomal subunit protein uL14, conserved siteInterproscan
IPR019906FamilyLarge ribosomal subunit protein uL6, bacterial-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR050674FamilyMsh Homeobox Transcriptional RegulatorsInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10848MEIOTIC RECOMBINATION PROTEIN SPO11Interproscan
PTHR23303CARBOXYPEPTIDASE REGULATORY REGION-CONTAININGInterproscan
PTHR14619NEURON-DERIVED NEUROTROPHIC FACTORInterproscan
PTHR43876UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIALInterproscan
PTHR21057PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASEInterproscan
PTHR1222050S/60S RIBOSOMAL PROTEIN L16Interproscan
PTHR24338HOMEOBOX PROTEIN MSXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0000228Cellular Componentnuclear chromosomeInterproscan
GO:0000706Biological Processmeiotic DNA double-strand break processingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003918Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0007131Biological Processreciprocal meiotic recombinationInterproscan
GO:0042138Biological Processmeiotic DNA double-strand break formationInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006259Biological ProcessDNA metabolic processInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0006744Biological Processubiquinone biosynthetic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0016709Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygenInterproscan
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008676Molecular Function3-deoxy-8-phosphooctulonate synthase activityInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0019294Biological Processketo-3-deoxy-D-manno-octulosonic acid biosynthetic processInterproscan
GO:0046364Biological Processmonosaccharide biosynthetic processInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0022625Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0015934Cellular Componentlarge ribosomal subunitInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048598Biological Processembryonic morphogenesisInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01627kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase)EC:2.5.1.55
Membrane traffickingko04131deepkoala
Transcription factorsko03000deepkoala
Lipopolysaccharide biosynthesis proteinsko01005deepkoala

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