Detailed information of g3.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_268119624.1, glutamate synthase-related protein [Methylobacter sp. YRD-M1]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P39812Glutamate synthase [NADPH] large chain OS=Bacillus subtilis (strain 168) OX=224308 GN=gltA PE=1 SV=3
Q1XDB2Ferredoxin-dependent glutamate synthase OS=Pyropia yezoensis OX=2788 GN=gltB PE=3 SV=1
P51375Ferredoxin-dependent glutamate synthase OS=Porphyra purpurea OX=2787 GN=gltB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07714PK_Tyr_Ser-ThrProtein tyrosine and serine/threonine kinaseDomainInterproscan
PF04898Glu_syn_centralGlutamate synthase central domainDomainInterproscan
PF00310GATase_2Glutamine amidotransferases class-IIDomainInterproscan
PF01645Glu_synthaseConserved region in glutamate synthaseDomainInterproscan
PF01493GXGXGGXGXG motifFamilyInterproscan
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF01603B56Protein phosphatase 2A regulatory B subunit (B56 family)RepeatInterproscan
PF07992Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductaseDomainInterproscan
PF02852Pyr_redox_dimPyridine nucleotide-disulphide oxidoreductase, dimerisation domainDomainInterproscan
PF02939UcrQUcrQ familyFamilyInterproscan
PF02146SIR2Sir2 familyFamilyInterproscan
PF18701DUF5641Family of unknown function (DUF5641)DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001245DomainSerine-threonine/tyrosine-protein kinase, catalytic domainInterproscan
IPR050198FamilyNon-receptor tyrosine kinases involved in cell signalingInterproscan
IPR020067DomainFrizzled domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR036790Homologous_superfamilyFrizzled cysteine-rich domain superfamilyInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR006982DomainGlutamate synthase, central-NInterproscan
IPR017932DomainGlutamine amidotransferase type 2 domainInterproscan
IPR002932DomainGlutamate synthase domainInterproscan
IPR036485Homologous_superfamilyGlutamate synthase, alpha subunit, C-terminal domain superfamilyInterproscan
IPR002489DomainGlutamate synthase, alpha subunit, C-terminalInterproscan
IPR029055Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR050711FamilyElectron transfer and nitrogen metabolism enzymeInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR047131FamilyRNA binding protein fox-1 homolog 1-likeInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR002554FamilyProtein phosphatase 2A, regulatory B subunit, B56Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR023753DomainFAD/NAD(P)-binding domainInterproscan
IPR046952FamilyGlutathione reductase/thioredoxin reductase-likeInterproscan
IPR016156Homologous_superfamilyFAD/NAD-linked reductase, dimerisation domain superfamilyInterproscan
IPR006338FamilyThioredoxin/glutathione reductase selenoproteinInterproscan
IPR004099DomainPyridine nucleotide-disulphide oxidoreductase, dimerisation domainInterproscan
IPR012999Active_sitePyridine nucleotide-disulphide oxidoreductase, class I, active siteInterproscan
IPR036642Homologous_superfamilyCytochrome b-c1 complex subunit 8 superfamilyInterproscan
IPR004205FamilyCytochrome b-c1 complex subunit 8Interproscan
IPR003000FamilySirtuin familyInterproscan
IPR026590DomainSirtuin family, catalytic core domainInterproscan
IPR050134FamilyNAD-dependent sirtuin protein deacylasesInterproscan
IPR026591Homologous_superfamilySirtuin, catalytic core small domain superfamilyInterproscan
IPR029035Homologous_superfamilyDHS-like NAD/FAD-binding domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR040676DomainDomain of unknown function DUF5641Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24418TYROSINE-PROTEIN KINASEInterproscan
PTHR11938FAD NADPH DEHYDROGENASE/OXIDOREDUCTASEInterproscan
PTHR15597ATAXIN 2-BINDING PROTEIN 1-RELATEDInterproscan
PTHR10257SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT BInterproscan
PTHR42737GLUTATHIONE REDUCTASEInterproscan
PTHR12119UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX UBIQUINONE-BINDING PROTEIN QP-CInterproscan
PTHR11085NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATEDInterproscan
PTHR22955RETROTRANSPOSONInterproscan
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004713Molecular Functionprotein tyrosine kinase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006807Biological Processobsolete nitrogen compound metabolic processInterproscan
GO:0015930Molecular Functionglutamate synthase activityInterproscan
GO:0006537Biological Processglutamate biosynthetic processInterproscan
GO:0016638Molecular Functionoxidoreductase activity, acting on the CH-NH2 group of donorsInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0019676Biological Processammonia assimilation cycleInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007399Biological Processnervous system developmentInterproscan
GO:0000159Cellular Componentprotein phosphatase type 2A complexInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0019888Molecular Functionprotein phosphatase regulator activityInterproscan
GO:0072542Molecular Functionprotein phosphatase activator activityInterproscan
GO:0004362Molecular Functionglutathione-disulfide reductase (NADPH) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006749Biological Processglutathione metabolic processInterproscan
GO:0034599Biological Processcellular response to oxidative stressInterproscan
GO:0045454Biological Processcell redox homeostasisInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0004791Molecular Functionthioredoxin-disulfide reductase (NADPH) activityInterproscan
GO:0016668Molecular Functionoxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptorInterproscan
GO:0005750Cellular Componentobsolete mitochondrial respiratory chain complex IIIInterproscan
GO:0006122Biological Processmitochondrial electron transport, ubiquinol to cytochrome cInterproscan
GO:0070403Molecular FunctionNAD+ bindingInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0017136Molecular Functionhistone deacetylase activity, NAD-dependentInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11412SIRT2, SIR2L2; NAD-dependent protein deacetylase sirtuin 2EC:2.3.1.286
Peptidases and inhibitorsko01002deepkoala
Hepatocellular carcinomako05225deepkoala
Chromosome and associated proteinsko03036deepkoala

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