Detailed information of g30.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCG8544281.1, DNA mismatch repair protein MutS [Alphaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A5VN83DNA mismatch repair protein MutS OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) OX=444178 GN=mutS PE=3 SV=1
Q2YNZ0DNA mismatch repair protein MutS OS=Brucella abortus (strain 2308) OX=359391 GN=mutS PE=3 SV=1
Q57FM9DNA mismatch repair protein MutS OS=Brucella abortus biovar 1 (strain 9-941) OX=262698 GN=mutS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00305LipoxygenaseLipoxygenaseDomainInterproscan
PF00654Voltage_CLCVoltage gated chloride channelFamilyInterproscan
PF04910Tcf25Transcriptional repressor TCF25RepeatInterproscan
PF03283PAEPectinacetylesteraseFamilyInterproscan
PF12742Gryzun-likeGryzun, putative Golgi traffickingDomainInterproscan
PF01602Adaptin_NAdaptin N terminal regionRepeatInterproscan
PF05190MutS_IVMutS family domain IVDomainInterproscan
PF00488MutS_VMutS domain VDomainInterproscan
PF05192MutS_IIIMutS domain IIIDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13561adh_short_C2Enoyl-(Acyl carrier protein) reductaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000907FamilyLipoxygenaseInterproscan
IPR013819DomainLipoxygenase, C-terminalInterproscan
IPR036226Homologous_superfamilyLipoxigenase, C-terminal domain superfamilyInterproscan
IPR046342Homologous_superfamilyCBS domain superfamilyInterproscan
IPR014743Homologous_superfamilyChloride channel, coreInterproscan
IPR001807FamilyChloride channel, voltage gatedInterproscan
IPR050970FamilyVoltage-gated chloride channelInterproscan
IPR006994FamilyTCF25/Rqc1Interproscan
IPR004963FamilyPectinacetylesterase/NOTUMInterproscan
IPR025876DomainTrafficking protein particle complex subunit 11, C-terminalInterproscan
IPR050840FamilyAdaptor Complexes Large SubunitInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR002553DomainClathrin/coatomer adaptor, adaptin-like, N-terminalInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR007861DomainDNA mismatch repair protein MutS, clampInterproscan
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011184FamilyDNA mismatch repair Msh2-typeInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036720Homologous_superfamilyRan-GTPase activating protein 1, C-terminal domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR051737FamilyL-xylulose reductase/Carbonyl reductaseInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11771LIPOXYGENASEInterproscan
PTHR45720CHLORIDE CHANNEL PROTEIN 2Interproscan
PTHR22684NULP1-RELATEDInterproscan
PTHR21562NOTUM-RELATEDInterproscan
PTHR22780ADAPTIN, ALPHA/GAMMA/EPSILONInterproscan
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan
PTHR24118POTE ANKYRIN DOMAINInterproscan
PTHR44252D-ERYTHRULOSE REDUCTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0034440Biological Processlipid oxidationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005247Molecular Functionvoltage-gated chloride channel activityInterproscan
GO:0006821Biological Processchloride transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:1990112Cellular ComponentRQC complexInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0030124Cellular ComponentAP-4 adaptor complexInterproscan
GO:0140312Molecular Functioncargo adaptor activityInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030117Cellular Componentmembrane coatInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0004090Molecular Functioncarbonyl reductase (NADPH) activityInterproscan
GO:0005997Biological Processxylulose metabolic processInterproscan
GO:0006006Biological Processglucose metabolic processInterproscan
GO:0050038Molecular FunctionL-xylulose reductase (NADPH) activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05011CLCN2; chloride channel 2-DNA repair and recombination proteinsko03400deepkoala
Ribosome biogenesisko03009deepkoala
Ion channelsko04040deepkoala

TOP