Detailed information of g3000.t1 in Acropora digitifera

Genomic Location: chr2Alt:7462361...7470810
NR annotation: XP_015748071.1, PREDICTED: ubiquitin-associated domain-containing protein 1-like [Acropora digitifera]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28DG7Ubiquitin-associated domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubac1 PE=2 SV=1
Q5ZJI9Ubiquitin-associated domain-containing protein 1 OS=Gallus gallus OX=9031 GN=UBAC1 PE=2 SV=1
Q8VDI7Ubiquitin-associated domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubac1 PE=1 SV=2
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|Alpha-Helix|UBA · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00627
all species →
UBAUBA/TS-N domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015940
all species →
DomainUbiquitin-associated domainInterproscan
IPR041926
all species →
DomainUBAC1, UBA domain 1Interproscan
IPR009060
all species →
Homologous_superfamilyUBA-like superfamilyInterproscan
IPR052476
all species →
FamilyUbiquitin-associated domain-containing protein 1Interproscan
IPR000626
all species →
DomainUbiquitin-like domainInterproscan
IPR041927
all species →
DomainUBAC1, UBA domain 2Interproscan
IPR029071
all species →
Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46738
all species →
UBIQUITIN-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000151
all species →
Cellular Componentubiquitin ligase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g3000.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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