Detailed information of g30037.t1 in Acropora digitifera

Genomic Location: chr14Alt:11878225...11879834
NR annotation: ROL46693.1, Pogo transposable element with KRAB domain [Anabarilius grahami]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03184
all species →		DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF09607
all species →		BrkDBDBrinker DNA-binding domainDomainInterproscan
PF03221
all species →		HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004875
all species →		DomainDDE superfamily endonuclease domainInterproscan
IPR018586
all species →		DomainBrinker DNA-binding domainInterproscan
IPR006600
all species →		DomainHTH CenpB-type DNA-binding domainInterproscan
IPR050863
all species →		FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR010921
all species →		Homologous_superfamilyTrp repressor/replication initiatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303
all species →		TRANSPOSONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0043565
all species →		Molecular Functionsequence-specific DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g30037.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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