Detailed information of g30455.t1 in Acropora digitifera

Genomic Location: chr14Alt:19350512...19360225
NR annotation: XP_015768528.1, PREDICTED: fibronectin-like [Acropora digitifera]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P50282Matrix metalloproteinase-9 OS=Rattus norvegicus OX=10116 GN=Mmp9 PE=2 SV=1
O18733Matrix metalloproteinase-9 OS=Canis lupus familiaris OX=9615 GN=MMP9 PE=2 SV=2
P41245Matrix metalloproteinase-9 OS=Mus musculus OX=10090 GN=Mmp9 PE=1 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01549
all species →		ShKShK domain-likeDomainInterproscan
PF00040
all species →		fn2Fibronectin type II domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000562
all species →		DomainFibronectin type II domainInterproscan
IPR036943
all species →		Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR003582
all species →		DomainShKT domainInterproscan
IPR013806
all species →		Homologous_superfamilyKringle-like foldInterproscan
IPR051666
all species →		FamilySeminal Plasma Capacitation RegulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22918
all species →		SEMINAL PLASMA PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008201
all species →		Molecular Functionheparin bindingInterproscan
GO:0009986
all species →		Cellular Componentcell surfaceInterproscan
GO:0048240
all species →		Biological Processsperm capacitationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g30455.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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