Detailed information of g30506.t1 in Acropora digitifera

Genomic Location: chr14Alt:20102377...20129000
NR annotation: XP_044181442.1, neurogenic locus Notch protein-like isoform X3 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
G8HTB6ZP domain-containing protein OS=Acropora millepora OX=45264 PE=1 SV=1
Q9PVW8Rhamnose-binding lectin OS=Silurus asotus OX=30991 PE=1 SV=1
P86179L-rhamnose-binding lectin CSL3 OS=Oncorhynchus keta OX=8018 PE=1 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00100
all species →		Zona_pellucidaZona pellucida-like domainFamilyInterproscan
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF02140
all species →		Gal_LectinGalactose binding lectin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR001507
all species →		DomainZona pellucida domainInterproscan
IPR048290
all species →		DomainZona pellucida domain, chordate-typeInterproscan
IPR043159
all species →		Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR000922
all species →		DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR042235
all species →		Homologous_superfamilyZona pellucida, ZP-C domainInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46780
all species →		PROTEIN EVA-1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030246
all species →		Molecular Functioncarbohydrate bindingInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g30506.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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