Detailed information of g30540.t1 in Acropora digitifera

Genomic Location: chr14Alt:20531671...20533266
NR annotation: XP_029187351.2, uncharacterized protein LOC114954833 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 adaptor Cullin RING|SOCS · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00622
all species →		SPRYSPRY domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043136
all species →		Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR001496
all species →		DomainSOCS box domainInterproscan
IPR050672
all species →		FamilyF-box/SPRY and SOCS box protein familiesInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001870
all species →		DomainB30.2/SPRY domainInterproscan
IPR003877
all species →		DomainSPRY domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12245
all species →		SPRY DOMAIN CONTAINING SOCS BOX PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0019005
all species →		Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0043161
all species →		Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g30540.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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