Detailed information of g307.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: EDO31305.1, predicted protein [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3T106Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1
Q16629Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=1
Q8BL97Serine/arginine-rich splicing factor 7 OS=Mus musculus OX=10090 GN=Srsf7 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF02668TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan
PF19340GCP6_NGamma-tubulin complex component 6 N-terminusFamilyInterproscan
PF17681GCP_N_terminalGamma tubulin complex component N-terminalDomainInterproscan
PF02460PatchedPatched familyFamilyInterproscan
PF05380Peptidase_A17Pao retrotransposon peptidase FamilyInterproscan
PF00168C2C2 domainDomainInterproscan
PF19745FUT8_N_catAlpha-(1,6)-fucosyltransferase N- and catalytic domainsDomainInterproscan
PF00782DSPcDual specificity phosphatase, catalytic domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR050907FamilySerine/Arginine-Rich Splicing FactorInterproscan
IPR042098Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR050411FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan
IPR003819DomainTauD/TfdA-like domainInterproscan
IPR007259FamilyGamma-tubulin complex component proteinInterproscan
IPR045818DomainGamma-tubulin complex component 6, N-terminalInterproscan
IPR041470DomainGamma tubulin complex component protein, N-terminalInterproscan
IPR003392FamilyProtein patched/dispatchedInterproscan
IPR000731DomainSterol-sensing domainInterproscan
IPR051697FamilyPatched domain-containing proteinInterproscan
IPR008042FamilyRetrotransposon, PaoInterproscan
IPR036279Homologous_superfamily5'-3' exonuclease, C-terminal domain superfamilyInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR000008DomainC2 domainInterproscan
IPR037768DomainCopine, C2B domainInterproscan
IPR045052FamilyCopineInterproscan
IPR027350DomainGlycosyltransferase family 23 (GT23) domainInterproscan
IPR045573DomainAlpha-(1,6)-fucosyltransferase, N- and catalytic domainInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR016278FamilyDual specificity protein phosphatase 12Interproscan
IPR020422DomainDual specificity protein phosphatase domainInterproscan
IPR016130Active_siteProtein-tyrosine phosphatase, active siteInterproscan
IPR000387DomainTyrosine-specific protein phosphatases domainInterproscan
IPR000340DomainDual specificity phosphatase, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23147SERINE/ARGININE RICH SPLICING FACTORInterproscan
PTHR10696GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan
PTHR19302GAMMA TUBULIN COMPLEX PROTEINInterproscan
PTHR10796PATCHED-RELATEDInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR47018CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan
PTHR10857COPINEInterproscan
PTHR13132ALPHA- 1,6 -FUCOSYLTRANSFERASEInterproscan
PTHR45848DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0016607Cellular Componentnuclear speckInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0045329Biological Processcarnitine biosynthetic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0000922Cellular Componentspindle poleInterproscan
GO:0000923Cellular Componentequatorial microtubule organizing centerInterproscan
GO:0000930Cellular Componentgamma-tubulin complexInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0005815Cellular Componentmicrotubule organizing centerInterproscan
GO:0007020Biological Processmicrotubule nucleationInterproscan
GO:0031122Biological Processcytoplasmic microtubule organizationInterproscan
GO:0043015Molecular Functiongamma-tubulin bindingInterproscan
GO:0051011Molecular Functionmicrotubule minus-end bindingInterproscan
GO:0051225Biological Processspindle assemblyInterproscan
GO:0051321Biological Processmeiotic cell cycleInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005544Molecular Functioncalcium-dependent phospholipid bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0071277Biological Processcellular response to calcium ionInterproscan
GO:0006487Biological Processprotein N-linked glycosylationInterproscan
GO:0036071Biological ProcessN-glycan fucosylationInterproscan
GO:0046921Molecular Functionalpha-(1->6)-fucosyltransferase activityInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0008138Molecular Functionprotein tyrosine/serine/threonine phosphatase activityInterproscan
GO:0016311Biological ProcessdephosphorylationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14819DUSP12, YVH1; dual specificity phosphatase 12EC:3.1.3.16
EC:3.1.3.48
Spliceosomeko03041deepkoala
Ribosome biogenesisko03009deepkoala

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