Detailed information of g30842.t1 in Acropora digitifera

Genomic Location: chr14Alt:23958317...23988396
NR annotation: XP_044162968.1, mucin-like protein isoform X1 [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B3EWY9Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q99102Mucin-4 OS=Homo sapiens OX=9606 GN=MUC4 PE=1 SV=5
Q8JZM8Mucin-4 OS=Mus musculus OX=10090 GN=Muc4 PE=2 SV=2
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12662
all species →		cEGFComplement Clr-like EGF-likeDomainInterproscan
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan
PF00094
all species →		VWDvon Willebrand factor type D domainDomainInterproscan
PF06119
all species →		NIDONidogen-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR026823
all species →		DomainComplement Clr-like EGF domainInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001846
all species →		Domainvon Willebrand factor, type D domainInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR003886
all species →		DomainNIDO domainInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR051495
all species →		FamilyEpithelial Barrier and Cell Signaling ProteinInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13802
all species →		MUCIN 4-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0007160
all species →		Biological Processcell-matrix adhesionInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g30842.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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