Detailed information of g309.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: CAB3994608.1, zinc finger Ran-binding domain-containing 2-like isoform X2 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5R580Zinc finger Ran-binding domain-containing protein 2 OS=Pongo abelii OX=9601 GN=ZRANB2 PE=2 SV=1
Q19QU3Zinc finger Ran-binding domain-containing protein 2 OS=Sus scrofa OX=9823 GN=ZRANB2 PE=2 SV=1
O95218Zinc finger Ran-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ZRANB2 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04130GCP_C_terminalGamma tubulin complex component C-terminalDomainInterproscan
PF08729HUNHPC2 and ubinuclein domainDomainInterproscan
PF14075UBN_ABUbinuclein conserved middle domainFamilyInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF07994NAD_binding_5Myo-inositol-1-phosphate synthaseFamilyInterproscan
PF01658Inos-1-P_synthMyo-inositol-1-phosphate synthaseFamilyInterproscan
PF00641zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan
PF01981PTH2Peptidyl-tRNA hydrolase PTH2FamilyInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040457DomainGamma tubulin complex component, C-terminalInterproscan
IPR007259FamilyGamma-tubulin complex component proteinInterproscan
IPR042241Homologous_superfamilyGamma-tubulin complex component, C-terminal domain superfamilyInterproscan
IPR014840DomainHpc2-related domainInterproscan
IPR026947DomainUbinuclein middle domainInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR026243FamilyHAUS augmin-like complex subunit 1Interproscan
IPR002587FamilyMyo-inositol-1-phosphate synthaseInterproscan
IPR013021DomainMyo-inositol-1-phosphate synthase, GAPDH-likeInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR017337FamilyZinc finger Ran-binding domain-containing protein 2Interproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR002833FamilyPeptidyl-tRNA hydrolase, PTH2Interproscan
IPR023476Homologous_superfamilyPeptidyl-tRNA hydrolase II domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan
IPR051941FamilyBlood Group Antigen-Binding LectinInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19302GAMMA TUBULIN COMPLEX PROTEINInterproscan
PTHR21669CAPZ-INTERACTING PROTEIN AND RELATED PROTEINSInterproscan
PTHR34615PX DOMAIN-CONTAINING PROTEINInterproscan
PTHR19854TRANSDUCIN BETA-LIKE 3Interproscan
PTHR45532WD REPEAT-CONTAINING PROTEIN 97Interproscan
PTHR31570HAUS AUGMIN-LIKE COMPLEX SUBUNIT 1Interproscan
PTHR11510MYO-INOSITOL-1 PHOSPHATE SYNTHASEInterproscan
PTHR12999ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATEDInterproscan
PTHR12649PEPTIDYL-TRNA HYDROLASE 2Interproscan
PTHR45713FTP DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0043015Molecular Functiongamma-tubulin bindingInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0000922Cellular Componentspindle poleInterproscan
GO:0000923Cellular Componentequatorial microtubule organizing centerInterproscan
GO:0000930Cellular Componentgamma-tubulin complexInterproscan
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0005815Cellular Componentmicrotubule organizing centerInterproscan
GO:0007020Biological Processmicrotubule nucleationInterproscan
GO:0031122Biological Processcytoplasmic microtubule organizationInterproscan
GO:0051011Molecular Functionmicrotubule minus-end bindingInterproscan
GO:0051225Biological Processspindle assemblyInterproscan
GO:0051321Biological Processmeiotic cell cycleInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006336Biological Processchromatin organizationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000472Biological Processendonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000480Biological Processendonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0034511Molecular FunctionU3 snoRNA bindingInterproscan
GO:0070652Cellular ComponentHAUS complexInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0007098Biological Processcentrosome cycleInterproscan
GO:0004512Molecular Functioninositol-3-phosphate synthase activityInterproscan
GO:0006021Biological Processinositol biosynthetic processInterproscan
GO:0008654Biological Processphospholipid biosynthetic processInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0001530Molecular Functionlipopolysaccharide bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004045Molecular Functionaminoacyl-tRNA hydrolase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01858INO1, ISYNA1; myo-inositol-1-phosphate synthaseEC:5.5.1.4
Spliceosomeko03041deepkoala
Translation factorsko03012deepkoala
Streptomycin biosynthesisko00521deepkoala

TOP