Gene detail

Detailed information of g30912.t1.1 in Blastomussa wellsi

Genomic Location: :...
NR annotation: XP_020622802.1, dnaJ homolog subfamily C member 28-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q8VCE1	DnaJ homolog subfamily C member 28 OS=Mus musculus OX=10090 GN=Dnajc28 PE=1 SV=2
Q9NX36	DnaJ homolog subfamily C member 28 OS=Homo sapiens OX=9606 GN=DNAJC28 PE=1 SV=2
Q5EB47	Protein lin-28 homolog A OS=Xenopus tropicalis OX=8364 GN=lin28a PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	CSD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00313	CSD	'Cold-shock' DNA-binding domain	Domain	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF00226	DnaJ	DnaJ domain	Domain	Interproscan
PF09350	DJC28_CD	DnaJ homologue, subfamily C, member 28, conserved domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR001623	Domain	DnaJ domain	Interproscan
IPR002059	Domain	Cold-shock protein, DNA-binding	Interproscan
IPR052573	Family	DnaJ homolog subfamily C member 28	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR011129	Domain	Cold shock domain	Interproscan
IPR018961	Domain	DnaJ homologue, subfamily C, member 28, conserved domain	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR019844	Domain	Cold-shock (CSD) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR39158	OS08G0560600 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07496	K07496; putative transposase	-	Replication and repair	-	deepkoala