Gene detail

Detailed information of g310.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_022779720.1, vitellogenin-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7ZXG7	Guanidinoacetate N-methyltransferase A OS=Xenopus laevis OX=8355 GN=gamt-a PE=2 SV=1
Q6PBF6	Guanidinoacetate N-methyltransferase OS=Xenopus tropicalis OX=8364 GN=gamt PE=2 SV=1
Q5HZ68	Guanidinoacetate N-methyltransferase B OS=Xenopus laevis OX=8355 GN=gamt-b PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan
PF00057	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan
PF09587	PGA_cap	Bacterial capsule synthesis protein PGA_cap	Domain	Interproscan
PF11788	MRP-L46	39S mitochondrial ribosomal protein L46	Family	Interproscan
PF13621	Cupin_8	Cupin-like domain	Domain	Interproscan
PF09172	Vit_open_b-sht	Vitellinogen, open beta-sheet	Domain	Interproscan
PF00094	VWD	von Willebrand factor type D domain	Domain	Interproscan
PF01347	Vitellogenin_N	Lipoprotein amino terminal region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023415	Conserved_site	Low-density lipoprotein (LDL) receptor class A, conserved site	Interproscan
IPR036055	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR050685	Family	Low-density lipoprotein receptor	Interproscan
IPR002172	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR029052	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR019079	Domain	Capsule synthesis protein, CapA	Interproscan
IPR052169	Family	Cell Wall Biosynthesis Accessory Protein	Interproscan
IPR040008	Family	Large ribosomal subunit protein mL46	Interproscan
IPR021757	Domain	Large ribosomal subunit protein mL46, N-terminal	Interproscan
IPR026480	Domain	Arginine N-methyltransferase 2-like domain	Interproscan
IPR051038	Family	RMT2/GAMT Methyltransferase	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR041667	Domain	Cupin-like domain 8	Interproscan
IPR003347	Domain	JmjC domain	Interproscan
IPR014710	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR001846	Domain	von Willebrand factor, type D domain	Interproscan
IPR015819	Homologous_superfamily	Lipid transport protein, beta-sheet shell	Interproscan
IPR001747	Domain	Vitellogenin, N-terminal	Interproscan
IPR050733	Family	Vitellogenin/Apolipophorin	Interproscan
IPR015255	Domain	Vitellinogen, open beta-sheet	Interproscan
IPR011030	Homologous_superfamily	Lipovitellin-phosvitin complex, superhelical domain	Interproscan
IPR015816	Homologous_superfamily	Vitellinogen, beta-sheet N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24270	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED	Interproscan
PTHR33393	POLYGLUTAMINE SYNTHESIS ACCESSORY PROTEIN RV0574C-RELATED	Interproscan
PTHR13124	39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED	Interproscan
PTHR32379	GUANIDINOACETATE N-METHYLTRANSFERASE	Interproscan
PTHR47331	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45532	WD REPEAT-CONTAINING PROTEIN 97	Interproscan
PTHR12461	HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED	Interproscan
PTHR23345	VITELLOGENIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005762	Cellular Component	mitochondrial large ribosomal subunit	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006601	Biological Process	creatine biosynthetic process	Interproscan
GO:0008757	Molecular Function	S-adenosylmethionine-dependent methyltransferase activity	Interproscan
GO:0030731	Molecular Function	guanidinoacetate N-methyltransferase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016706	Molecular Function	2-oxoglutarate-dependent dioxygenase activity	Interproscan
GO:0005319	Molecular Function	lipid transporter activity	Interproscan
GO:0006869	Biological Process	lipid transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10129	GTSE1, B99; G-2 and S-phase expressed protein 1	-	Arginine and proline metabolism	ko00330	deepkoala
K10129	GTSE1, B99; G-2 and S-phase expressed protein 1	-	p53 signaling pathway	ko04115	deepkoala