Genomic Location: chr14Alt:26833936...26849870
NR annotation: XP_029189620.2, E3 ubiquitin-protein ligase Midline-1-like [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families
| CDS |
| g31082.t1 |
| Transcript |
| chr14Alt.g31082.t1 |
| Protein |
| chr14Alt.g31082.t1 |
| UniProt accession | Description |
|---|---|
| O70583 | E3 ubiquitin-protein ligase Midline-1 OS=Mus musculus OX=10090 GN=Mid1 PE=1 SV=2 |
| O15344 | E3 ubiquitin-protein ligase Midline-1 OS=Homo sapiens OX=9606 GN=MID1 PE=1 SV=1 |
| P82458 | E3 ubiquitin-protein ligase Midline-1 OS=Rattus norvegicus OX=10116 GN=Mid1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | E3|E3 activity RING|RING · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00622 all species → | SPRY | SPRY domain | Family | Interproscan |
| PF00041 all species → | fn3 | Fibronectin type III domain | Domain | Interproscan |
| PF13445 all species → | zf-RING_UBOX | RING-type zinc-finger | Domain | Interproscan |
| PF00643 all species → | zf-B_box | B-box zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR017907 all species → | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR003877 all species → | Domain | SPRY domain | Interproscan |
| IPR001870 all species → | Domain | B30.2/SPRY domain | Interproscan |
| IPR013320 all species → | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR003961 all species → | Domain | Fibronectin type III | Interproscan |
| IPR043136 all species → | Homologous_superfamily | B30.2/SPRY domain superfamily | Interproscan |
| IPR000315 all species → | Domain | B-box-type zinc finger | Interproscan |
| IPR036116 all species → | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR017903 all species → | Domain | COS domain | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR050617 all species → | Family | E3 ubiquitin-protein ligases and FN3/SPRY domain-containing proteins | Interproscan |
| IPR027370 all species → | Domain | Zinc finger, RING-type, eukaryotic | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR003649 all species → | Domain | B-box, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24099 all species → | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
g31082.t1.
