Detailed information of g312.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: NQZ14908.1, NAD(P)/FAD-dependent oxidoreductase [Alphaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P37631Ribosomal RNA dihydrouridine synthase OS=Escherichia coli (strain K12) OX=83333 GN=rdsA PE=1 SV=3
P44941Ribosomal RNA dihydrouridine synthase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rdsA PE=1 SV=1
B1PUC6Aminoacetone oxidase OS=Streptococcus cristatus OX=45634 GN=aao(So) PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00019TGF_betaTransforming growth factor beta like domainDomainInterproscan
PF05960DUF885Bacterial protein of unknown function (DUF885)FamilyInterproscan
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF04677CwfJ_C_1Protein similar to CwfJ C-terminus 1FamilyInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF00069PkinaseProtein kinase domainDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00025ArfADP-ribosylation factor familyDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF03486HI0933_likeHI0933-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001839DomainTransforming growth factor-beta, C-terminalInterproscan
IPR029034Homologous_superfamilyCystine-knot cytokineInterproscan
IPR017948Conserved_siteTransforming growth factor beta, conserved siteInterproscan
IPR015615FamilyTransforming growth factor-beta-relatedInterproscan
IPR010281FamilyProtein of unknown function DUF885Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR002350DomainKazal domainInterproscan
IPR050653FamilyProtease Inhibitors and Growth Factor AntagonistsInterproscan
IPR040194FamilyCwf19-like proteinInterproscan
IPR006768DomainCwf19-like, C-terminal domain-1Interproscan
IPR036265Homologous_superfamilyHIT-like superfamilyInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR006689FamilySmall GTPase superfamily, ARF/SAR typeInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR024156FamilySmall GTPase superfamily, ARF typeInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR023166Homologous_superfamilyHI0933-like insert domain superfamilyInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR004792Family3-Dehydro-bile acid delta(4,6)-reductase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11848TGF-BETA FAMILYInterproscan
PTHR33361GLR0591 PROTEINInterproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR10913FOLLISTATIN-RELATEDInterproscan
PTHR12072CWF19, CELL CYCLE CONTROL PROTEINInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan
PTHR24346MAP/MICROTUBULE AFFINITY-REGULATING KINASEInterproscan
PTHR11711ADP RIBOSYLATION FACTOR-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR42887OS12G0638800 PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008083Molecular Functiongrowth factor activityInterproscan
GO:0005125Molecular Functioncytokine activityInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0061632Molecular FunctionRNA lariat debranching enzyme activator activityInterproscan
GO:0071014Cellular Componentpost-mRNA release spliceosomal complexInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07963TRIM23, ARFD1; tripartite motif-containing protein 23EC:2.3.2.27
Protein kinasesko01001deepkoala
GTP-binding proteinsko04031deepkoala

TOP