Detailed information of g313.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_115937529.1, glycine cleavage system aminomethyltransferase GcvT [Aestuariispira insulae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O14110Probable aminomethyltransferase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gcv1 PE=3 SV=1
P54260Aminomethyltransferase, mitochondrial OS=Solanum tuberosum OX=4113 GN=GDCST PE=2 SV=1
O49849Aminomethyltransferase, mitochondrial OS=Flaveria anomala OX=35877 GN=GDCST PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00069PkinaseProtein kinase domainDomainInterproscan
PF01571GCV_TAminomethyltransferase folate-binding domainDomainInterproscan
PF08669GCV_T_CGlycine cleavage T-protein C-terminal barrel domainDomainInterproscan
PF00568WH1WH1 domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02671PAHPaired amphipathic helix repeatRepeatInterproscan
PF13921Myb_DNA-bind_6Myb-like DNA-binding domainDomainInterproscan
PF01607CBM_14Chitin binding Peritrophin-A domainDomainInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan
PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 3DomainInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045216FamilyCasein Kinase 2, subunit alphaInterproscan
IPR017441Binding_siteProtein kinase, ATP binding siteInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR008271Active_siteSerine/threonine-protein kinase, active siteInterproscan
IPR000719DomainProtein kinase domainInterproscan
IPR028896FamilyAminomethyltransferase-likeInterproscan
IPR029043Homologous_superfamilyGlycine cleavage T-protein/YgfZ, C-terminalInterproscan
IPR006222DomainAminomethyltransferase, folate-binding domainInterproscan
IPR013977DomainGlycine cleavage T-protein, C-terminal barrel domainInterproscan
IPR006223FamilyGlycine cleavage system T proteinInterproscan
IPR027266Homologous_superfamilyGTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1Interproscan
IPR000697DomainWH1/EVH1 domainInterproscan
IPR045027FamilyHomer familyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR052435FamilyYY1-Associated Transcriptional RegulatorInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR003822RepeatPaired amphipathic helixInterproscan
IPR036600Homologous_superfamilyPaired amphipathic helix superfamilyInterproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR002557DomainChitin binding domainInterproscan
IPR001223DomainGlycoside hydrolase family 18, catalytic domainInterproscan
IPR050542FamilyGlycosyl Hydrolase 18 Family ChitinasesInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR015683FamilyIonotropic glutamate receptorInterproscan
IPR001638DomainSolute-binding protein family 3/N-terminal domain of MltFInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR050995FamilyWD repeat and F-box domain-containing proteinInterproscan
IPR000867DomainInsulin-like growth factor-binding protein, IGFBPInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR011390FamilyInsulin-like growth factor binding protein-related protein (IGFBP-rP), MAC25Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR051367FamilymRNA Translation Regulation/Replication-dependent Histone mRNA TranslationInterproscan
IPR052350FamilyMetallo-dependent LactonasesInterproscan
IPR032466Homologous_superfamilyMetal-dependent hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24054CASEIN KINASE II SUBUNIT ALPHAInterproscan
PTHR43757AMINOMETHYLTRANSFERASEInterproscan
PTHR10918HOMERInterproscan
PTHR33332REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR16088YY1 ASSOCIATED PROTEIN-RELATEDInterproscan
PTHR45708ENDOCHITINASEInterproscan
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan
PTHR14604WD40 REPEAT PF20Interproscan
PTHR14186INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATEDInterproscan
PTHR23254EIF4G DOMAIN PROTEINInterproscan
PTHR43569AMIDOHYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005956Cellular Componentprotein kinase CK2 complexInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0018105Biological Processpeptidyl-serine phosphorylationInterproscan
GO:0018107Biological Processpeptidyl-threonine phosphorylationInterproscan
GO:0051726Biological Processregulation of cell cycleInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0004047Molecular Functionaminomethyltransferase activityInterproscan
GO:0006546Biological Processglycine catabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007216Biological ProcessG protein-coupled glutamate receptor signaling pathwayInterproscan
GO:0035256Molecular FunctionG protein-coupled glutamate receptor bindingInterproscan
GO:2001256Biological Processregulation of store-operated calcium entryInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0004568Molecular Functionchitinase activityInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0035082Biological Processaxoneme assemblyInterproscan
GO:1990716Cellular Componentaxonemal central apparatusInterproscan
GO:0001558Biological Processregulation of cell growthInterproscan
GO:0005520Molecular Functioninsulin-like growth factor bindingInterproscan
GO:0009966Biological Processregulation of signal transductionInterproscan
GO:0006446Biological Processregulation of translational initiationInterproscan
GO:0008494Molecular Functiontranslation activator activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01558WNT16; wingless-type MMTV integration site family, member 16-One carbon pool by folateko00670deepkoala
Cilium and associated proteinsko03037deepkoala
Messenger RNA biogenesisko03019deepkoala
Ribosome biogenesisko03009deepkoala
Glycosaminoglycan binding proteinsko00536deepkoala

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