Detailed information of g314.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: WP_168877947.1, aminomethyl-transferring glycine dehydrogenase [Leeia aquatica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q46VZ5Glycine dehydrogenase (decarboxylating) OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) OX=264198 GN=gcvP PE=3 SV=1
Q72VI8Glycine dehydrogenase (decarboxylating) OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=gcvP PE=3 SV=1
Q8F937Glycine dehydrogenase (decarboxylating) OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) OX=189518 GN=gcvP PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12717Cnd1non-SMC mitotic condensation complex subunit 1RepeatInterproscan
PF01602Adaptin_NAdaptin N terminal regionRepeatInterproscan
PF12090Spt20_SEPSpt20, SEP domainDomainInterproscan
PF02347GDC-PGlycine cleavage system P-proteinDomainInterproscan
PF21478GcvP2_CGlycine dehydrogenase, C-terminal domainDomainInterproscan
PF00206Lyase_1LyaseDomainInterproscan
PF10415FumaraseC_CFumarase C C-terminusDomainInterproscan
PF10166DUF2368Uncharacterised conserved protein (DUF2368)FamilyInterproscan
PF13913zf-C2HC_2zinc-finger of a C2HC-typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000225RepeatArmadilloInterproscan
IPR026739FamilyAP complex subunit betaInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR032682DomainCondensin complex subunit 1, C-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR016342FamilyAP-1/2/4 complex subunit betaInterproscan
IPR002553DomainClathrin/coatomer adaptor, adaptin-like, N-terminalInterproscan
IPR046468DomainSpt20-like, SEP domainInterproscan
IPR021950FamilyTranscription factor Spt20Interproscan
IPR020581FamilyGlycine cleavage system P proteinInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR003437FamilyGlycine dehydrogenase (decarboxylating)Interproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR049315DomainGlycine cleavage system P-protein, N-terminal domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR049316DomainGlycine dehydrogenase, C-terminal domainInterproscan
IPR003124DomainWH2 domainInterproscan
IPR008948Homologous_superfamilyL-Aspartase-likeInterproscan
IPR020557Conserved_siteFumarate lyase, conserved siteInterproscan
IPR000362FamilyFumarate lyase familyInterproscan
IPR005677FamilyFumarate hydratase, class IIInterproscan
IPR022761DomainFumarate lyase, N-terminalInterproscan
IPR018951DomainFumarase C, C-terminalInterproscan
IPR019319FamilyPlasminogen receptor (KT)Interproscan
IPR026319FamilyZinc finger C2HC domain-containing protein 1A/B-likeInterproscan
IPR049899DomainZinc finger, C2HC/C3H-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11134ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBERInterproscan
PTHR13526TRANSCRIPTION FACTOR SPT20 HOMOLOGInterproscan
PTHR11773GLYCINE DEHYDROGENASE, DECARBOXYLATINGInterproscan
PTHR11444ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASEInterproscan
PTHR13411PLASMINOGEN RECEPTOR (KT)Interproscan
PTHR13555C2H2 ZINC FINGER CGI-62-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0015031Biological Processprotein transportInterproscan
GO:0030276Molecular Functionclathrin bindingInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0030117Cellular Componentmembrane coatInterproscan
GO:0000124Cellular ComponentSAGA complexInterproscan
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0004375Molecular Functionglycine dehydrogenase (decarboxylating) activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005960Cellular Componentglycine cleavage complexInterproscan
GO:0006546Biological Processglycine catabolic processInterproscan
GO:0016594Molecular Functionglycine bindingInterproscan
GO:0019464Biological Processglycine decarboxylation via glycine cleavage systemInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0006544Biological Processglycine metabolic processInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004333Molecular Functionfumarate hydratase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0006106Biological Processfumarate metabolic processInterproscan
GO:0006108Biological Processmalate metabolic processInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0010756Biological Processpositive regulation of plasminogen activationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01679E4.2.1.2B, fumC, FH; fumarate hydratase, class IIEC:4.2.1.2
Lipoic acid metabolismko00785deepkoala
Chromosome and associated proteinsko03036deepkoala
Cushing syndromeko04934deepkoala

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