Genomic Location: xfSc0002852:446...7722
NR annotation: KAJ7381195.1, DNA-binding protein SMUBP-2 [Desmophyllum pertusum]
Species abbreviation MCAPI · all data for this species · gene families
| CDS |
| g31470.t1 |
| Transcript |
| g31470.t1 |
| Protein |
| g31470.t1 |
| UniProt accession | Description |
|---|---|
| Q60560 | DNA-binding protein SMUBP-2 OS=Mesocricetus auratus OX=10036 GN=IGHMBP2 PE=1 SV=1 |
| P38935 | DNA-binding protein SMUBP-2 OS=Homo sapiens OX=9606 GN=IGHMBP2 PE=1 SV=3 |
| Q9EQN5 | DNA-binding protein SMUBP-2 OS=Rattus norvegicus OX=10116 GN=Ighmbp2 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004138 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13086 all species → | AAA_11 | AAA domain | Domain | Interproscan |
| PF21138 all species → | SMUBP-2_HCS1_1B | Helicase SMUBP-2/HCS1, 1B domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050534 all species → | Family | Coronaviruses polyprotein 1ab | Interproscan |
| IPR041677 all species → | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
| IPR048761 all species → | Domain | Helicase SMUBP-2/HCS1, 1B domain | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR003593 all species → | Domain | AAA+ ATPase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43788 all species → | DNA2/NAM7 HELICASE FAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0043139 all species → | Molecular Function | 5'-3' DNA helicase activity | Interproscan |
| GO:0004386 all species → | Molecular Function | helicase activity | Interproscan |
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0016887 all species → | Molecular Function | ATP hydrolysis activity | Interproscan |
g31470.t1.
