Detailed information of g3155.t1 in Tripedalia maipoensis

Genomic Location: scaffold_13:9166276...9285110
NR annotation: no NCBI-NR hit recorded
Species abbreviation TMAIP · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13385
all species →
Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF20425
all species →
NeurobeachinNeurobeachin alpha solenoid regionRepeatInterproscan
PF20426
all species →
NBCH_WD40Neurobeachin beta propeller domainRepeatInterproscan
PF15787
all species →
DUF4704Neurobeachin/BDCP, DUF4704 alpha solenoid regionRepeatInterproscan
PF02138
all species →
BeachBeige/BEACH domainFamilyInterproscan
PF14844
all species →
PH_BEACHPH domain associated with Beige/BEACHDomainInterproscan
PF06469
all species →
DUF1088Neurobeachin-like, DUF1088DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR000409
all species →
DomainBEACH domainInterproscan
IPR023362
all species →
DomainPH-BEACH domainInterproscan
IPR036372
all species →
Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR046852
all species →
DomainNeurobeachin, alpha-solenoid regionInterproscan
IPR046851
all species →
DomainNeurobeachin, beta-propeller domainInterproscan
IPR031570
all species →
DomainNeurobeachin/BDCP, DUF4704Interproscan
IPR036322
all species →
Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR001680
all species →
RepeatWD40 repeatInterproscan
IPR010508
all species →
DomainNeurobeachin-like, DUF1088Interproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR050865
all species →
FamilyBEACH Domain-ContainingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13743
all species →
BEIGE/BEACH-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0008104
all species →
Biological Processprotein localizationInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0019901
all species →
Molecular Functionprotein kinase bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g3155.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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