Gene detail

Detailed information of g316.t1 in Calvadosia cruxmelitensis

Genomic Location: not available for this species
NR annotation: MBO6835323.1, iron-sulfur cluster carrier protein ApbC [Alphaproteobacteria bacterium]
Species Calvadosia cruxmelitensis · all data for this species · gene families

Sequence

Sequence data are not available for Calvadosia cruxmelitensis.
Nucleotide and protein sequences are provided for the species whose genome annotation is complete (see annotated genomes); for this species only the assembly is archived. The functional annotation below is likewise unavailable.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8TB37	Iron-sulfur cluster transfer protein NUBPL OS=Homo sapiens OX=9606 GN=NUBPL PE=1 SV=3
Q9CWD8	Iron-sulfur cluster transfer protein NUBPL OS=Mus musculus OX=10090 GN=Nubpl PE=1 SV=2
Q54F15	Iron-sulfur cluster transfer protein NUBPL OS=Dictyostelium discoideum OX=44689 GN=nubpl PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000297 (this species only)
Orthogroup (gene family)	OG0000510 (this species only)
Orthogroup (gene family)	OG0001618 (this species only)
Orthogroup (gene family)	OG0003071 (this species only)
Orthogroup (gene family)	OG0003366 (this species only)
Orthogroup (gene family)	OG0003908 (this species only)
Orthogroup (gene family)	OG0005678 (this species only)
Orthogroup (gene family)	OG0007027 (this species only)
Orthogroup (gene family)	OG0012158 (this species only)
Orthogroup (gene family)	OG0016717 (this species only)
Orthogroup (gene family)	OG0019892 (this species only)
Orthogroup (gene family)	OG0036204 (this species only)
Orthogroup (gene family)	OG0048250 (this species only)
Orthogroup (gene family)	OG0080645 (this species only)
Orthogroup (gene family)	OG0171507 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00169 all species →	PH	PH domain	Domain	Interproscan
PF10609 all species →	ParA	NUBPL iron-transfer P-loop NTPase	Family	Interproscan
PF01883 all species →	FeS_assembly_P	Iron-sulfur cluster assembly protein	Domain	Interproscan
PF07648 all species →	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan
PF00050 all species →	Kazal_1	Kazal-type serine protease inhibitor domain	Domain	Interproscan
PF01843 all species →	DIL	DIL domain	Repeat	Interproscan
PF00788 all species →	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF01064 all species →	Activin_recp	Activin types I and II receptor domain	Domain	Interproscan
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF12698 all species →	ABC2_membrane_3	ABC-2 family transporter protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045188 all species →	Family	PH domain containing protein Boi1/Boi2-like	Interproscan
IPR023393 all species →	Homologous_superfamily	START-like domain superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR033756 all species →	Family	Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35	Interproscan
IPR044304 all species →	Family	Iron-sulfur protein NUBPL-like	Interproscan
IPR019591 all species →	Family	Mrp/NBP35 ATP-binding protein	Interproscan
IPR034904 all species →	Homologous_superfamily	Fe-S cluster assembly domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002744 all species →	Domain	MIP18 family-like	Interproscan
IPR000808 all species →	Conserved_site	Iron-sulfur cluster carrier protein-like, conserved site	Interproscan
IPR002350 all species →	Domain	Kazal domain	Interproscan
IPR036058 all species →	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR050653 all species →	Family	Protease Inhibitors and Growth Factor Antagonists	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR002710 all species →	Domain	Dilute domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR052072 all species →	Family	Vascular development regulator domain-containing protein	Interproscan
IPR000159 all species →	Domain	Ras-associating domain	Interproscan
IPR008984 all species →	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR045860 all species →	Homologous_superfamily	Snake toxin-like superfamily	Interproscan
IPR000333 all species →	Family	Ser/Thr protein kinase, TGFB receptor	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000472 all species →	Domain	Activin types I and II receptor domain	Interproscan
IPR026082 all species →	Family	ABC transporter A	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR013525 all species →	Domain	ABC-2 type transporter, transmembrane domain	Interproscan
IPR045126 all species →	Family	Trafficking protein particle complex subunit TRAPPC10/Trs130	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22902 all species →	SESQUIPEDALIAN	Interproscan
PTHR33198 all species →	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR42961 all species →	IRON-SULFUR PROTEIN NUBPL	Interproscan
PTHR10913 all species →	FOLLISTATIN-RELATED	Interproscan
PTHR33327 all species →	ENDONUCLEASE	Interproscan
PTHR16027 all species →	DILUTE DOMAIN-CONTAINING PROTEIN YPR089W	Interproscan
PTHR23255 all species →	TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II	Interproscan
PTHR19229 all species →	ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA	Interproscan
PTHR13251 all species →	EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001881 all species →	Biological Process	receptor recycling	Interproscan
GO:0005769 all species →	Cellular Component	early endosome	Interproscan
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan
GO:0007032 all species →	Biological Process	endosome organization	Interproscan
GO:0042147 all species →	Biological Process	retrograde transport, endosome to Golgi	Interproscan
GO:0055037 all species →	Cellular Component	recycling endosome	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016226 all species →	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0140663 all species →	Molecular Function	ATP-dependent FeS chaperone activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0030154 all species →	Biological Process	cell differentiation	Interproscan
GO:0051020 all species →	Molecular Function	GTPase binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004675 all species →	Molecular Function	transmembrane receptor protein serine/threonine kinase activity	Interproscan
GO:0007178 all species →	Biological Process	cell surface receptor protein serine/threonine kinase signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0017002 all species →	Molecular Function	activin receptor activity	Interproscan
GO:0032924 all species →	Biological Process	activin receptor signaling pathway	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0048179 all species →	Cellular Component	activin receptor complex	Interproscan
GO:0048185 all species →	Molecular Function	activin binding	Interproscan
GO:0071363 all species →	Biological Process	cellular response to growth factor stimulus	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0140359 all species →	Molecular Function	ABC-type transporter activity	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0006891 all species →	Biological Process	intra-Golgi vesicle-mediated transport	Interproscan
GO:0034498 all species →	Biological Process	early endosome to Golgi transport	Interproscan
GO:0048193 all species →	Biological Process	Golgi vesicle transport	Interproscan
GO:1990071 all species →	Cellular Component	TRAPPII protein complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03593	mrp, NUBPL; ATP-binding protein involved in chromosome partitioning	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.