Detailed information of g322.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: GJL90671.1, MAG: co-chaperone YbbN [Marinicaulis sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P00275Thioredoxin C-1 OS=Corynebacterium nephridii OX=1722 PE=1 SV=1
P97493Thioredoxin, mitochondrial OS=Mus musculus OX=10090 GN=Txn2 PE=1 SV=1
P97615Thioredoxin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Txn2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF14561TPR_20Tetratricopeptide repeatRepeatInterproscan
PF00085ThioredoxinThioredoxinDomainInterproscan
PF14559TPR_19Tetratricopeptide repeatRepeatInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF00373FERM_MFERM central domainDomainInterproscan
PF00063Myosin_headMyosin head (motor domain)DomainInterproscan
PF00784MyTH4MyTH4 domainFamilyInterproscan
PF00018SH3_1SH3 domainDomainInterproscan
PF01725Ham1p_likeHam1 familyDomainInterproscan
PF16566CREPTCell-cycle alteration and expression-elevated protein in tumourDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050966FamilyGlutamyl EndopeptidaseInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR018114Active_siteSerine proteases, trypsin family, histidine active siteInterproscan
IPR008256FamilyPeptidase S1BInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR017937Conserved_siteThioredoxin, conserved siteInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013766DomainThioredoxin domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR052970FamilyInner ear hair cell lipoxygenase homology domain-containing proteinInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR019748DomainFERM central domainInterproscan
IPR041794DomainMyosin VII, FERM domain C-lobe, repeat 2Interproscan
IPR000857DomainMyTH4 domainInterproscan
IPR001609DomainMyosin head, motor domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR035963Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR051567FamilyUnconventional Myosin ATPaseInterproscan
IPR000299DomainFERM domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR000048Binding_siteIQ motif, EF-hand binding siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR041793DomainMyosin VII, FERM domain C-lobe, repeat 1Interproscan
IPR038185Homologous_superfamilyMyTH4 domain superfamilyInterproscan
IPR019749DomainBand 4.1 domainInterproscan
IPR036106DomainClass VII myosin, motor domainInterproscan
IPR001452DomainSH3 domainInterproscan
IPR014352Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR036961Homologous_superfamilyKinesin motor domain superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR029001Homologous_superfamilyInosine triphosphate pyrophosphatase-likeInterproscan
IPR002637FamilyRdgB/HAM1Interproscan
IPR004721FamilyDihydroorotase homodimeric typeInterproscan
IPR032466Homologous_superfamilyMetal-dependent hydrolaseInterproscan
IPR002195Conserved_siteDihydroorotase, conserved siteInterproscan
IPR032337DomainRPRD1A/B, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR15462SERINE PROTEASEInterproscan
PTHR43601THIOREDOXIN, MITOCHONDRIALInterproscan
PTHR13318UNCHARACTERIZEDInterproscan
PTHR45901PROTEIN CBG12474Interproscan
PTHR22692MYOSIN VII, XVInterproscan
PTHR11067INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEINInterproscan
PTHR43137DIHYDROOROTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008236Molecular Functionserine-type peptidase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0045454Biological Processcell redox homeostasisInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0003774Molecular Functioncytoskeletal motor activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016459Cellular Componentmyosin complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0009143Biological Processnucleoside triphosphate catabolic processInterproscan
GO:0047429Molecular Functionnucleoside triphosphate diphosphatase activityInterproscan
GO:0004151Molecular Functiondihydroorotase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006207Biological Process'de novo' pyrimidine nucleobase biosynthetic processInterproscan
GO:0006221Biological Processpyrimidine nucleotide biosynthetic processInterproscan
GO:0019856Biological Processpyrimidine nucleobase biosynthetic processInterproscan
GO:0016812Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidesInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10359MYO7A, USH1B; myosin VIIa-Chaperones and folding catalystsko03110deepkoala
Cytoskeleton proteinsko04812deepkoala

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