Detailed information of g324.t1 in Montipora capitata

Genomic Location: Sc0000003:329781...353559
NR annotation: XP_029189284.2, E3 ubiquitin-protein ligase UBR2-like [Acropora millepora]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IWV8E3 ubiquitin-protein ligase UBR2 OS=Homo sapiens OX=9606 GN=UBR2 PE=1 SV=1
Q6WKZ8E3 ubiquitin-protein ligase UBR2 OS=Mus musculus OX=10090 GN=Ubr2 PE=1 SV=2
Q8IWV7E3 ubiquitin-protein ligase UBR1 OS=Homo sapiens OX=9606 GN=UBR1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003166 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
No Pfam domain signature was detected for g324.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR039164
all species →
FamilyE3 ubiquitin-protein ligase UBR1-likeInterproscan
IPR042065
all species →
Homologous_superfamilyE3 ubiquitin-protein ligase ELL-likeInterproscan
IPR036390
all species →
Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21497
all species →
UBIQUITIN LIGASE E3 ALPHA-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan
GO:0071596
all species →
Biological Processubiquitin-dependent protein catabolic process via the N-end rule pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g324.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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