Gene detail

Detailed information of g32454.t1.1 in Astreopora myriophthalma

Genomic Location: not available for this species
NR annotation: XP_015755823.1, PREDICTED: uncharacterized protein LOC107335331 [Acropora digitifera]
Species abbreviation AMYRI · all data for this species · gene families

Sequence

CDS

g32454.t1

ATGCCCTTCACCGATAAAAATTCGCCCTGTAGGAGAGCGACGCATTGCTGCTTGAGATGTGATCGAACTTTTAAGCGCAAAGAGGGATTCCTTCAACACTTAGAGCAGAACTCCAGACATCGCGATGTATGGTTACTGGAAAGCTGTTACCGCTGCGCAAGATCGTTTTCAAACACCAAAGCCTTAATGCAACATGTTCAAAACAACAGACATCATTTCGGGGATCTTCACCACTTTGCTTGTACGGGCCAATTTCAGTTTATAGTGGATCGCATTATGACAACTAATGATCGTGCCGATTGGCCTGGCGATTCACACATTCGACCGAATTGCCAGACGGGCTTTACGCCGATGCACTGTGCAGCTTTCGGTGGATATTACAAGTGCCTTAAGATCATGCTTTCCTGGGAGGATGGAAAGCCAAATGTTGTCGATCCCAGAGATGGTAGGACACCCGTTCATCTTGCTGCCTGGAAAGGTCACGCGAACTGCCTGAGATTGTTGCTTCGAAATGGGGGCAGCTTGCATTTACCGGATCACGAAGGAATAACTCCCCTCCATTTATCATCGGATGCCACTTGTTTGTCTATAATTCTGCTTCATTTGGTGGATGAAGACACAAGGCTTCACGTGAGAGATTCTCAAGCATCAGAGCAAAATCTGGGAGCTGTGGAACAAGTGTGGAACCGGCTTCATGGCGAAGATAGTTATCAAAAAGAGTTGTGTGTGCTTCCAGAAACATGTTATGTGGAAGAGATCCATGAAGCAGGTCAAGTTGTTTGTCAGGTGTCACGAATTGTACCAAAAACTGAAGTGGAATCTGTTTGGATTTCAGAAACTTACAGTCAACCTTATGAAGTCCTTGTTAGAGGAGAAGTAGCAGTAACAATATTCAACGAGGCTCTCCTCGAAGGAAAAGCTCAAGTGACTCGTATGCAGCTCACTGTGGTTGGCGATGTTGGTGCAGGCAAGACAAGCTTGGTACGAAATCTCAGTGGCGAACAATTCGAAGAGGAGAGGAGTGAGACGCATGGAATTAATACATCCATGGTCGAGGTGACAGAGCTTGATGATTCATGGCACACTGCTGACTTGAACAAGTCCCATGTTGATGATATCTTGTCTGACAAGGTCTGTAAAGGTATCAGGGAGGTATCCAGCGAGGGGAACGGGCAAAGCGTACAAGTGTTCCAGCTGAGTTCATCCGATCCAGGGCCTGCATCATTCCCTTCTTCTCGCAGAATAATGCGACTTCCTAGCATCGAATCTCCCCCTGGATCTTCCACCACAGATAATAGCAGTGATCAGGAAAAAAAGGTTTCAGCATCATCTGCAGATCGCTTTAGTTGGTCTAACAGTGAGACGACAGCTCCGCGCAACATACCACTGGAGCagattaaaagaaaattgagtGAGCCAACGAATGCCAAGAAGGGAAAGTACACCAAAATTAGCATTTGGGACTTTGCCGGCCACCCTTTGTACCAAGCAATGCACCATGTGTTTCTGAACCGGCGATCTTTTTACCTTGTGGTGACAAACTTAGTTCAGTTGTGCAACCCTGAAAAGAAAGATGAAGCGTTTGAAAAACTCCTTTTCTGGCTCAACTCTGTCCGTGTTCACACCCCTCGGACCACGCCAATATTCCTGGTGGGTACACATCGCGATCAAGTTAGCCAGCAAGATATTTCTGCTGCAGAAAATACACTGTACACAAAACTTTTGGAGGCGTTCGGTCAGCAGTTGGTGAGGAGCGAAGAGAAGAGTTTCTTATTTACTGTAGAAAACACCTCTGATAGTGAAGATCCTGGTGTCATGATGCTGAAGAAAGCAATCGAGGAAGAGGCTTCCCGGCTAATGCTAATGGACGAGGAGTTGCCTGTCTTGTGGCTTCACTTCGAAGAGGAACTCCTTAAGTGCAGGGAGATGCCAGGCTGCTCAGCCTGTGTAACTAAGTCCTTGCTGAGAAACATGTTGGAAAGCCATTACCAGATCGTTGATGAGATGTTTGAAAGCATGTTACACTTCTATCATGACAGTGGTGTGATCATCCTACCAGAAGAGCTAATCGGCCCAAAGATACAAGACCCGAGAATCAACGACCTGGTGGTCATCAAGCCCCAGTATCTAGTCGATGTCATGACCTGCCTTCATGACATTCCAGACCATGTAGATGTCGATCGGCAGCATTGCACCAAGTGGAAGACTCTCCAAGATCGTGGGATAACAGACATCGGCTTCCTGGAGCAAGTCTGGAAGGACTTCAATAGTTCTGCCACAGAACTTGTTGGCATCTTGGAAGCTTCTGGTATGCTGTGTCCAATCTCGGCTTTGAAAGAAGCCGAAGACCCGGAGGTCTTTGGTGAAGGAGAAGAAAGTGAAGCATTGGGATCAGGGGTCAGCAGCTACATATTTCCTTGCCACTTGAGAGTAAAATGCCTCAAACGAAAGTGGGAGAGACTCTGCCGCAAAACATGGAGTGCAATTTGCAACTTGGATAAGATCCTCGTGTTTGActttttcaatttccttccACCCGCTCTATTCAGCTACTTCATTGTTCGCACAGCTGTAAAAAGCGAGTCCAGTGATGGCATGAGGCCCATCATGGCTAAAGAGATGGCCATCTTCTCTTTTGGAGACAGCTTCTTTATTCTTACTGAGCATTGCCAGAAACACAACCAGATAAAAATCAGAGCTAGGTATAAGAATGGCAAAAAGCTGCACGAATTGTTCAGCATCTTGATGTTTATCATGACAGAGATTTGCCAGCGGCAGTTCAAATTCTTGAAGTTTAATTTTGGTACAGTTTGTCCCAACCCACGCTGCCCGGGTGCCTCGGGCAATGGCAAGGTTCTCGCTGTGGACTCTTCATCCGATGAAAGCGATGTTGAGGATGGCTGCTCCACGTGCGATGAGGCCCGTGGGTATCCGCGCAAGGACGAAAGTCGCTGTCACGTGATATCCATTGATCCAGCCCTACCATCTCGACCCCTGTGGTGTAACAGCACTCCTGTCCACGAATTTGAAGAGATCAAGCAGTGGTTTATTAAGCCTCAAGAAGTCGCATCGAAAGTTTCCGAGGATTCTCCTTGTTTTTCCATGAAAGTTGAGGTCTGCTGTCAGGCCATAGTCGCCAAGGCAATGGCTAACAAGTGGAAGTGGTTGGGCAGGGCGCTCGGTGTTGCCGATACAACCATTGAGAACATCCACACTGAGAACGAATCGCAAGAGGAGCGGTGCTATAAAGTCATCAGTATCTGGGCGCGGACAACAGCGGGCTCCAAGGCTACAGTGCTTTCTCTGATGAAGGCCATAGAAGAGGTTGGCATCGTAGAAGCTATGGAGGCATTTGATCGTCACTTGGCTGAGAGACACGCGGAAGAAGCATCTGCCGATGTTTAG

Transcript

g32454.t1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6XHA5	Probable serine/threonine-protein kinase roco11 OS=Dictyostelium discoideum OX=44689 GN=roco11 PE=3 SV=1
Q8SSS9	Probable serine/threonine-protein kinase qkgA OS=Dictyostelium discoideum OX=44689 GN=qkgA-1 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003720 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531 all species →	Death	Death domain	Domain	Interproscan
PF08477 all species →	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488 all species →	Domain	Death domain	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR011029 all species →	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR050776 all species →	Family	Ankyrin Repeat and Cyclin-Dependent Kinase Inhibitor	Interproscan
IPR020859 all species →	Domain	Roc domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24201 all species →	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g32454.t1.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.