Gene detail

Detailed information of g3250.t1 in Montipora capitata

Genomic Location: Sc0000054:676132...691616
NR annotation: XP_015772765.1, PREDICTED: dedicator of cytokinesis protein 5-like [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g3250.t1

atgatggacaagaacactcctccggatagtgatgtactggaatcagacaaacaatatttacaatgctgccgagtgattcccatctccgaacacgaggaacgattttcaggaaaagttgtggacgacaaaattgctggttattatcgtgttaatgacgtcaaacgctttaccaactcgagacctttgcggccaggctccgaggattttgcgaacttgtggttggagaggacaacgtatgttatcgtctcgaatcttccaggaattcttcgatggtttctaatcacatcctccaacagtgttgaagttagtccggtgctgaatgctgttgaaactgttgagtccaagaataaagaactcggacgaatcatcgcccgtctttctgcagacaagacgcaaagtatcaacccgcttagcatgattctgaatggggtcattgatgctgctgtcatgggaggcatagctaaatatgaagaggcattttttaacccagaatacctcttaaaaaacccaaacgatgggcaccttgtggaccggctaaaaggcgccatagaaaaccaggtcaaagttttggagacaggcctcgaacttcacgatgaattaactactaaagatcttcgtcctttccatctgaagatggaaacttgttttgctgatatgaaggtccgagtcactggagaacgccgaaagccaccaagaccgaacacgctaccgacgcctaattcaaagaagagacgccagtcggaacaaagcactcgccagagcttgtggtacaataaagaacccaaccagataactgaatcaaagtccctcgaggtcctttcagagatcaacgaaccagctcctcccgttcccgtcaagggttctagatcagacagttctcccgctgactctccggaagcgatacgtcgcaaaagtgttctctccggcaaaattcaacataggagctcatcgcctgccagtattctccgacaccccacaccggcctttccatcgcaacagaatggacggacatctcctgccatccccccgaagcgcaagagtgttttagtccacagcccctcggatatggacacctcaaagtcagggggcccaccaacgaacgctacaataaacgaaacacgacctggagatgaatccatttcaaatccttctacctatgaaggaagtctccctgcattgcccccaaagagatcggtgtctcgcttgtcttccgaggttaatgaacttttagctccagaaaaacgtaagccccatcctaccttgacgccctgtgatgatgatgattctggtctggcgccagaacttccagagaagagaaagagttacctaagcaacgcatcgagccgcacaagtcgagcgtcgtccgtcttctcagattcagcacctgaccagtcatgtcccttgtctcccttctccccgtcagggcattttagcgataaaatgggaaacacattacggagtccctttcccctggactctcgtggctcgtccggatcctccacgtcaacgttatcagtttcgactcctcgacgagatgtcgggggtgttccttcctcgagctcaaataacaatagctatagttatgtcacaccgccgagttccccgctcgtaccctacgacaaagttacttccccccgagattccgtagctagctggatgtcggagaacacaagctatttttccgcgtcttcatttaattctgatataatatcacctggaagtccgcctgtttctgaactggaattgggcaatggggaaccgtcgttgactctaacaccacagaatcttgatctcgtcaccgaagcttcgccaaacgttaacgacttaactccaccgcttgctcccgtaagggcactacagacatttggatcaccagttgaaagttggtcattttcagaggccacatctgcagtgacatcggtaactacgcgatcggaatcgagggtcgtgtcccgagagtcccgcacgcccgttcccatcccccggagaggcacagttggtgcttttagtagacctcgtggattgctttctcgatcgttttctgacgtgaccgattttgtcgccacgaggagcgataaggtaccacctccggtcatgccgcggaaatcaatgatagatccaagttctatgtccccaccgccgaaacccccccggccttctcaatcgtcagccgccacgaaaccggctccgccattacctaaaccttacgcttccaaggcaatggacgattctttctcctcaattcaagggaaaactgtgaattctgagaggaaagagacgtaa

Transcript

g3250.t1

ATGATGGACAAGAACACTCCTCCGGATAGTGATGTACTGGAATCAGACAAACAATATTTACAATGCTGCCGAGTGATTCCCATCTCCGAACACGAGGAACGATTTTCAGGAAAAGTTGTGGACGACAAAATTGCTGGtTATTATCGTGTTAATGACGTCAAACGCTTTACCAACTCGAGACCTTTGCGGCCAGGCTCCGAGGATTTTGCGAACTTGTGGTTGGAGAGGACAACGTATGTTATCGTCTCGAATCTTCCAGGAATTCTTCGATGGTTTCTAATCACATCCTCCAACAGTGTTGAAGTTAGTCCGGTGCTGAATGCTGTTGAAACTGTTGAGTCCAAGAATAAAGAACTCGGACGAATCATCGCCCGTCTTTCTGCAGACAAGACGCAAAGTATCAACCCGCTTAGCATGATTCTGAATGGGGTCATTGATGCTGCTGTCATGGGAGGCATAGCTAAATATGAAGAGGCATTTTTTAACCCAGAATACCTCTTAAAAAACCCAAACGATGGGCACCTTGTGGACCGGCTAAAAGGCGCCATAGAAAACCAGGTCAAAGTTTTGGAGACAGGCCTCGAACTTCACGATGAATTAACTACTAAAGATCTTCGTCCTTTCCATCTGAAGATGGAAACTTGTTTTGCTGATATGAAGGTCCGAGTCACTGGAGAACGCCGAAAGCCACCAAGACCGAACACGCTACCGACGCCTAATTCAAAGAAGAGACGCCAGTCGGAACAAAGCACTCGCCAGAGCTTGTGGTACAATAAAGAACCCAACCAGATAACTGAATCAAAGTCCCTCGAGGTCCTTTCAGAGATCAACGAACCAGCTCCTCCCGTTCCCGTCAAGGGTTCTAGATCAGACAGTTCTCCCGCTGACTCTCCGGAAGCGATACGTCGCAAAAGTGTTCTCTCCGGCAAAATTCAACATAGGAGCTCATCGCCTGCCAGTATTCTCCGACACCCCACACCGGCCTTTCCATCGCAACAGAAtgGACGGACATCTCCTGCCATCCCCCCGAAGCGCAAGAGTGTTTTAGTCCACAGCCCCTCGGATATGGACACCTCAAAGTCAGGGGGCCCACCAACGAACGCTACAATAAACGAAACACGACCTGGAGATGAATCCATTTCAAATCCTTCTACCTATGAAGGAAGTCTCCCTGCATTGCCCCCAAAGAGATCGGTGTCTCGCTTGTCTTCCGAGGTTAATGAACTTTTAGCTCCAGAAAAACGTAAGCCCCATCCTACCTTGACGCcctgtgatgatgatgattctgGTCTGGCGCCAGAACTTCCAGAGAAGAGAAAGAGTTACCTAAGCAACGCATCGAGCCGCACAAGTCGAGCGTCGTCCGTCTTCTCAGATTCAGCACCTGACCAGTCATGTCCCTTGTCTCCCTTCTCCCCGTCAGGGCATTTTAGCGATAAAATGGGAAACACATTACGGAGTCCCTTTCCCCTGGACTCTCGTGGCTCGTCCGGATCCTCCACGTCAACGTTATCAGTTTCGACTCCTCGACGAGATGTCGGGGGTGTTCCTTCCTCGAGCTCAAATAACAATAGCTATAGTTATGTCACACCGCCGAGTTCCCCGCTCGTACCCTACGACAAAGTTACTTCCCCCCGAGATTCCGTAGCTAGCTGGATGTCGGAGAACACAAGCTATTTTTCCGCGTCTTCATTTAATTCTGATATAATATCACCTGGAAGTCCGCCTGTTTCTGAACTGGAATTGGGCAATGGGGAACCGTCGTTGACTCTAACACCACAGAATCTTGATCTCGTCACCGAAGCTTCGCCAAACGTTAACGACTTAACTCCACCGCTTGCTCCCGTAAGGGCACTACAGACATTTGGATCACCAGTTGAAAGTTGGTCATTTTCAGAGGCCACATCTGCAGTGACATCGGTAACTACGCGATCGGAATCGAGGGTCGTGTCCCGAGAGTCCCGCACGCCCGTTCCCATCCCCCGGAGAGGCACAGTTGGTGCTTTTAGTAGACCTCGTGGATTGCTTTCTCGATCGTTTTCTGACGTGACCGATTTTGTCGCCACGAGGAGCGATAAGGTACCACCTCCGGTCATGCCGCGGAAATCAATGATAGATCCAAGTTCTATGTCCCCACCGCCGAAACCCCCCCGGCCTTCTCAATCGTCAGCCGCCACGAAACCGGCTCCGCCATTACCTAAACCTTACGCTTCCAAGGCAATGGACGATTCTTTCTCCTCAATTCAAGGGAAAACTGTGAATTCTGAGAGGAAAGAGACGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q92608	Dedicator of cytokinesis protein 2 OS=Homo sapiens OX=9606 GN=DOCK2 PE=1 SV=2
Q8C3J5	Dedicator of cytokinesis protein 2 OS=Mus musculus OX=10090 GN=Dock2 PE=1 SV=3
Q9H7D0	Dedicator of cytokinesis protein 5 OS=Homo sapiens OX=9606 GN=DOCK5 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001194 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20421 all species →	DHR-2_Lobe_C	DHR-2, Lobe C	Repeat	Interproscan
PF20422 all species →	DHR-2_Lobe_B	DHR-2, Lobe B	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026791 all species →	Family	Dedicator of cytokinesis	Interproscan
IPR043162 all species →	Homologous_superfamily	Dedicator of cytokinesis, C-terminal, lobe C	Interproscan
IPR046773 all species →	Domain	DOCKER, Lobe C	Interproscan
IPR027357 all species →	Domain	DOCKER domain	Interproscan
IPR046770 all species →	Domain	DOCKER, Lobe B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45653 all species →	DEDICATOR OF CYTOKINESIS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007264 all species →	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for g3250.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.