Gene detail

Detailed information of g326.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBF0293453.1, DUF935 family protein [Nitrospinota bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q3TMV7	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 OS=Mus musculus OX=10090 GN=Pyroxd1 PE=2 SV=1
A7YVH9	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 OS=Bos taurus OX=9913 GN=PYROXD1 PE=2 SV=1
Q8WU10	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 OS=Homo sapiens OX=9606 GN=PYROXD1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10551	MULE	MULE transposase domain	Domain	Interproscan
PF01608	I_LWEQ	I/LWEQ domain	Family	Interproscan
PF07651	ANTH	ANTH domain	Repeat	Interproscan
PF10186	ATG14	Vacuolar sorting 38 and autophagy-related subunit 14	Family	Interproscan
PF21787	TNP-like_RNaseH_N	TNP-like, RNase H N-terminal domain	Domain	Interproscan
PF15309	ALMS_motif	ALMS motif	Family	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF06074	DUF935	Protein of unknown function (DUF935)	Family	Interproscan
PF19798	Sulfotransfer_5	Sulfotransferase domain	Domain	Interproscan
PF07992	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan
PF18267	Rubredoxin_C	Rubredoxin NAD+ reductase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018289	Domain	MULE transposase domain	Interproscan
IPR008942	Homologous_superfamily	ENTH/VHS	Interproscan
IPR002558	Domain	I/LWEQ domain	Interproscan
IPR035964	Homologous_superfamily	I/LWEQ domain superfamily	Interproscan
IPR013809	Domain	ENTH domain	Interproscan
IPR030224	Family	Sla2 family	Interproscan
IPR011417	Domain	AP180 N-terminal homology (ANTH) domain	Interproscan
IPR018791	Family	UV radiation resistance protein/autophagy-related protein 14	Interproscan
IPR048365	Domain	Transposable element P transposase-like, RNase H domain, N-terminal	Interproscan
IPR029299	Domain	ALMS motif	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR045164	Family	RNA-binding region-containing protein RBM41/RNPC3	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR009279	Family	Protein of unknown function DUF935	Interproscan
IPR053226	Family	Pyrrolopyrazine Biosynthesis Cluster Protein F	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR023753	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR016156	Homologous_superfamily	FAD/NAD-linked reductase, dimerisation domain superfamily	Interproscan
IPR041575	Domain	NADH-rubredoxin oxidoreductase, C-terminal	Interproscan
IPR050260	Family	FAD-dependent Oxidoreductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10407	HUNTINGTIN INTERACTING PROTEIN 1	Interproscan
PTHR13664	BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR	Interproscan
PTHR16105	UNCHARACTERIZED	Interproscan
PTHR48331	SULFOTRANSFERASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR43429	PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0006897	Biological Process	endocytosis	Interproscan
GO:0007015	Biological Process	actin filament organization	Interproscan
GO:0030136	Cellular Component	clathrin-coated vesicle	Interproscan
GO:0030276	Molecular Function	clathrin binding	Interproscan
GO:0030479	Cellular Component	actin cortical patch	Interproscan
GO:0032051	Molecular Function	clathrin light chain binding	Interproscan
GO:0035615	Molecular Function	clathrin adaptor activity	Interproscan
GO:0043325	Molecular Function	phosphatidylinositol-3,4-bisphosphate binding	Interproscan
GO:0048268	Biological Process	clathrin coat assembly	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:0080025	Molecular Function	phosphatidylinositol-3,5-bisphosphate binding	Interproscan
GO:0005543	Molecular Function	phospholipid binding	Interproscan
GO:0000045	Biological Process	autophagosome assembly	Interproscan
GO:0000423	Biological Process	mitophagy	Interproscan
GO:0005776	Cellular Component	autophagosome	Interproscan
GO:0009267	Biological Process	cellular response to starvation	Interproscan
GO:0035032	Cellular Component	phosphatidylinositol 3-kinase complex, class III	Interproscan
GO:0043552	Biological Process	obsolete positive regulation of phosphatidylinositol 3-kinase activity	Interproscan
GO:0097629	Cellular Component	extrinsic component of omegasome membrane	Interproscan
GO:0097632	Cellular Component	extrinsic component of phagophore assembly site membrane	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0005689	Cellular Component	U12-type spliceosomal complex	Interproscan
GO:0030626	Molecular Function	U12 snRNA binding	Interproscan
GO:0097157	Molecular Function	pre-mRNA intronic binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17889	ATG14L, ATG14; beclin 1-associated autophagy-related key regulator	-	Enzymes with EC numbers	-	deepkoala
K17889		-	Mitochondrial biogenesis	ko03029	deepkoala