Gene detail

Detailed information of g3263.t1 in Acropora digitifera

Genomic Location: chr2Alt:10598687...10618974
NR annotation: XP_029200091.2, phosphatidylinositol 3-kinase catalytic subunit type 3-like isoform X1 [Acropora millepora]
Species abbreviation ADIGI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

g3263.t1

ATGGCTCAGGGGACCAACATGGTGGATCCAAATTCAAGTCAGGAGAGGTTCTACTACGTTTATAGCTGTGACTTGGACACAAATCTAGAACTTAAAGTATGTACGTTGGAAGGTAAAAGGGAACGAAAAGGTTACAAAGAGTTGCTGAACGACCCTCAGTTGAGATACTCTGGAGTTTATGAAAGCGAGTGTTCGGACCTGTATGTAACTTGTCAAGTCTTTTCTGATGGTCAGCCATTGTGTCTTCCCACAAGGACATCTTACAAACCTTTCAGCACGAGGTGGAATTGGAATGAATGGCTTAAGTTACCTGTTAAATATCCTGATCTGCCACGAAACGCTCAAGCTTGTTTCACTATCTGGGATGTTTACGGACCACGAAAGGCCATTCCAGTTGGTGGAACTACTGTCTCCCTTTTTGGGAAACATGGGACACAACGTCGTGGAATGCACGACTTAAAGGTTTGGCCTGGGGTAGAAGCTGATGGACAAAAAAACACCACTACTCCTGGAAAATCAACATCTGGGGAGGACCAAATGAGTAGACTCGCTAAGCTCAGTAAAAAACATCACAAAGGAAGAATGCTGAAAGTTGATTGGTTAGACAGATTGACATTCAGAGAAATTGAAATGGTGAATGAGAGAGAAAAACGTAACTCCAATTTTATGTTTCTGATGATCAAGTTCCCAAGAGTTCATTATGATGGTTCGGAGTATTCTGTGGTACACTTCGAGAAGGATGCTGATGATGTTGACTATGTGTGTACTCATCCTGAAATCGTCAGAGTTCCAGACCCCGAGATTCTTTTGGAGAATTTGGTAGAACTGAAGCATCACAAACTCGTGAGGAGTATCAGAAGTGGAACAGTATCAAGGGACTTGAAACCAAATGCTAAAACCAGGGATCAATTAAATCAAATCGTGGGTTATCCATCTACAAAAGTACTTACATCTGAAGAAAAAGATTTGGTCTGGCAATTCAGATTTTATCTTACCAACCAAAAAAAGGCTCTGACCAAGTTTCTTAAGTGTGTTGACTGGAGTCAACCGCAAGAAGCCAAGCAGGCTATAGAATTGTTGGGAAAATGGAACCCAATGGATGTTGAGGACGCGTTGGAGTTGCTATCTTCACAGTTCACAAACAGAGCCGTCAGACAGTATGCTGTGTCAAGACTCAAGGAGGCCAATGATGAAGATTTGTTGCTTTACCTTCTTCAACTTGTGCAAGCTTTGCGTTACGAAACTTTATCAAGTGAGGAAGAGAAACTAACTGAAAACACAGTTGACAATCTTCTTGAGGAGAGCATTGAAAACCAAAACGCAGACACACCACCTACACAAGAAGTTCAAGAAATGAAGGTCAGCACAACCACATCAAAGCATGAGGGTTTAGATGATTTGGCTTCTTTCCTAATTTCAAGGGCTTGCAAAAGCGATTGTTTAGCAAATTATTTTTACTGGTATTTGGTTGTTGAGTGCCAGGAAGGCAGACAGACAAGAGAGGGATCTATGTACTTAAATGTTATGAGAAGGTTCAGTCATGAACTCATGAAGGGAGGATGGGAGTGTACAGTGAGGAGAAAAATGTTGGGAAAACAACAGGAGTTTGTTAACGCCATTGTTCGACTTGTGAAAGAAGTATCCCAATTTGGTGGCAGCCGCAACAAAAAGGTTCAAAGGTTAAGAGAGCTACTTGATGCAGCTGAACTAACATCATTTGGACCAATTCCTCTTCTTCTTGACCCTGAAACAAAAATAAAAGGAATTGTTGCTGAGAAAGCAAGTCTGTTTAAAAGTCATCTGATGCCTGCTAAACTCACATTTTTGACTCAGGATGATCATGAATATGTGACAATATTTAAGAATGGTGATGACTTGCGACAGGATCAGTTGATTCTTCAGATTATTAGACTTATGGATAAGCTCTTGATGAAGGAAAATTTGGATCTGAAGTTGACTCCTTACAAGGTCCTGGCCACCAGTGGAACTCATGGTTTTGTCCAGTTTGTTGAATCTACTCCTGTTGCTGAAGTACTGGACAAAGATGTGGATGGAAGTATTCAGAACTATTTTCGTAGGCATGCGCCTTGCGAAAGTGCACCCTATGGAATCAGCCCAGAGGTCATGGATACATATGTAAAAAGCTGTGCTGGCTATTGTGTGATTACATACATCCTGAGTGTAGGAGACAGACATCTTGACAACCTTCTGCTGACAAAATCAGGAAACCTGTTCCACATAGATTTTGGTTACATTCTTGGAAGAGATCCCAAACCACTGCCGCCGCCAATGAAACTTAGCAAAGAAATGGTGGAAGGAATGGGAGGTGCTTCTAGTGAGTTCTACCAAGCATTCAGGAAACAGTGTTTTACAGCTTTTCTTCACTTAAGAAGACACGTCAACTTGTTTTTAAACCTGTTTGCTTTGATGGTTGATGCAAATGTGCCTGACATTGCCCTGGAACCTGACAAAACTGTTAAAAAGGTGCAGGACAAATTCCGTCTTGACCTGAATGATGAAGAAGCCGTGCAGTACTTACAGTCACTCATTGATGAAAGTGTCAGTGCTATGTTTCCTGTTGTAGTTGAACAAATTCATAAGTTTGCACAGTACTGGAGAAGATAG

Transcript

chr2Alt.g3263.t1

TGACAGATCAAAGCGTTACACACAAATATATACCTACCTTCCGGTTGTCGCCCGAATAGTTACAAAACGGGCAAATGGCTCAGGGGACCAACATGGTGGATCCAAATTCAAGTCAGGAGAGGTTCTACTACGTTTATAGCTGTGACTTGGACACAAATCTAGAACTTAAAGTATGTACGTTGGAAGGTAAAAGGGAACGAAAAGGTTACAAAGAGTTGCTGAACGACCCTCAGTTGAGATACTCTGGAGTTTATGAAAGCGAGTGTTCGGACCTGTATGTAACTTGTCAAGTCTTTTCTGATGGTCAGCCATTGTGTCTTCCCACAAGGACATCTTACAAACCTTTCAGCACGAGGTGGAATTGGAATGAATGGCTTAAGTTACCTGTTAAATATCCTGATCTGCCACGAAACGCTCAAGCTTGTTTCACTATCTGGGATGTTTACGGACCACGAAAGGCCATTCCAGTTGGTGGAACTACTGTCTCCCTTTTTGGGAAACATGGGACACAACGTCGTGGAATGCACGACTTAAAGGTTTGGCCTGGGGTAGAAGCTGATGGACAAAAAAACACCACTACTCCTGGAAAATCAACATCTGGGGAGGACCAAATGAGTAGACTCGCTAAGCTCAGTAAAAAACATCACAAAGGAAGAATGCTGAAAGTTGATTGGTTAGACAGATTGACATTCAGAGAAATTGAAATGGTGAATGAGAGAGAAAAACGTAACTCCAATTTTATGTTTCTGATGATCAAGTTCCCAAGAGTTCATTATGATGGTTCGGAGTATTCTGTGGTACACTTCGAGAAGGATGCTGATGATGTTGACTATGTGTGTACTCATCCTGAAATCGTCAGAGTTCCAGACCCCGAGATTCTTTTGGAGAATTTGGTAGAACTGAAGCATCACAAACTCGTGAGGAGTATCAGAAGTGGAACAGTATCAAGGGACTTGAAACCAAATGCTAAAACCAGGGATCAATTAAATCAAATCGTGGGTTATCCATCTACAAAAGTACTTACATCTGAAGAAAAAGATTTGGTCTGGCAATTCAGATTTTATCTTACCAACCAAAAAAAGGCTCTGACCAAGTTTCTTAAGTGTGTTGACTGGAGTCAACCGCAAGAAGCCAAGCAGGCTATAGAATTGTTGGGAAAATGGAACCCAATGGATGTTGAGGACGCGTTGGAGTTGCTATCTTCACAGTTCACAAACAGAGCCGTCAGACAGTATGCTGTGTCAAGACTCAAGGAGGCCAATGATGAAGATTTGTTGCTTTACCTTCTTCAACTTGTGCAAGCTTTGCGTTACGAAACTTTATCAAGTGAGGAAGAGAAACTAACTGAAAACACAGTTGACAATCTTCTTGAGGAGAGCATTGAAAACCAAAACGCAGACACACCACCTACACAAGAAGTTCAAGAAATGAAGGTCAGCACAACCACATCAAAGCATGAGGGTTTAGATGATTTGGCTTCTTTCCTAATTTCAAGGGCTTGCAAAAGCGATTGTTTAGCAAATTATTTTTACTGGTATTTGGTTGTTGAGTGCCAGGAAGGCAGACAGACAAGAGAGGGATCTATGTACTTAAATGTTATGAGAAGGTTCAGTCATGAACTCATGAAGGGAGGATGGGAGTGTACAGTGAGGAGAAAAATGTTGGGAAAACAACAGGAGTTTGTTAACGCCATTGTTCGACTTGTGAAAGAAGTATCCCAATTTGGTGGCAGCCGCAACAAAAAGGTTCAAAGGTTAAGAGAGCTACTTGATGCAGCTGAACTAACATCATTTGGACCAATTCCTCTTCTTCTTGACCCTGAAACAAAAATAAAAGGAATTGTTGCTGAGAAAGCAAGTCTGTTTAAAAGTCATCTGATGCCTGCTAAACTCACATTTTTGACTCAGGATGATCATGAATATGTGACAATATTTAAGAATGGTGATGACTTGCGACAGGATCAGTTGATTCTTCAGATTATTAGACTTATGGATAAGCTCTTGATGAAGGAAAATTTGGATCTGAAGTTGACTCCTTACAAGGTCCTGGCCACCAGTGGAACTCATGGTTTTGTCCAGTTTGTTGAATCTACTCCTGTTGCTGAAGTACTGGACAAAGATGTGGATGGAAGTATTCAGAACTATTTTCGTAGGCATGCGCCTTGCGAAAGTGCACCCTATGGAATCAGCCCAGAGGTCATGGATACATATGTAAAAAGCTGTGCTGGCTATTGTGTGATTACATACATCCTGAGTGTAGGAGACAGACATCTTGACAACCTTCTGCTGACAAAATCAGGAAACCTGTTCCACATAGATTTTGGTTACATTCTTGGAAGAGATCCCAAACCACTGCCGCCGCCAATGAAACTTAGCAAAGAAATGGTGGAAGGAATGGGAGGTGCTTCTAGTGAGTTCTACCAAGCATTCAGGAAACAGTGTTTTACAGCTTTTCTTCACTTAAGAAGACACGTCAACTTGTTTTTAAACCTGTTTGCTTTGATGGTTGATGCAAATGTGCCTGACATTGCCCTGGAACCTGACAAAACTGTTAAAAAGGTGCAGGACAAATTCCGTCTTGACCTGAATGATGAAGAAGCCGTGCAGTACTTACAGTCACTCATTGATGAAAGTGTCAGTGCTATGTTTCCTGTTGTAGTTGAACAAATTCATAAGTTTGCACAGTACTGGAGAAGATAGAAAAGGAAAAGCCAAGGACCAGGAAAAAGACACACATGTCACACAATACCAAATTGTGTGTCCTTTATGGCACTGAATGCAGGTGTATCAAAATGTTGCTAGAATAGATAAACAGTGGAAAAGAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6AZN6	Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Xenopus laevis OX=8355 GN=pik3c3 PE=2 SV=1
Q6PF93	Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Mus musculus OX=10090 GN=Pik3c3 PE=1 SV=1
O88763	Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00454 all species →	PI3_PI4_kinase	Phosphatidylinositol 3- and 4-kinase	Family	Interproscan
PF00613 all species →	PI3Ka	Phosphoinositide 3-kinase family, accessory domain (PIK domain)	Repeat	Interproscan
PF00792 all species →	PI3K_C2	Phosphoinositide 3-kinase C2	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000403 all species →	Domain	Phosphatidylinositol 3-/4-kinase, catalytic domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR001263 all species →	Domain	Phosphoinositide 3-kinase, accessory (PIK) domain	Interproscan
IPR018936 all species →	Conserved_site	Phosphatidylinositol 3/4-kinase, conserved site	Interproscan
IPR015433 all species →	Family	Phosphatidylinositol kinase	Interproscan
IPR042236 all species →	Homologous_superfamily	Phosphoinositide 3-kinase, accessory (PIK) domain superfamily	Interproscan
IPR002420 all species →	Domain	C2 phosphatidylinositol 3-kinase-type domain	Interproscan
IPR036940 all species →	Homologous_superfamily	Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR008290 all species →	Family	Phosphatidylinositol 3-kinase, Vps34 type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10048 all species →	PHOSPHATIDYLINOSITOL KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0000045 all species →	Biological Process	autophagosome assembly	Interproscan
GO:0000407 all species →	Cellular Component	phagophore assembly site	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005768 all species →	Cellular Component	endosome	Interproscan
GO:0005777 all species →	Cellular Component	peroxisome	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0016303 all species →	Molecular Function	1-phosphatidylinositol-3-kinase activity	Interproscan
GO:0030242 all species →	Biological Process	autophagy of peroxisome	Interproscan
GO:0034271 all species →	Cellular Component	phosphatidylinositol 3-kinase complex, class III, type I	Interproscan
GO:0034272 all species →	Cellular Component	phosphatidylinositol 3-kinase complex, class III, type II	Interproscan
GO:0036092 all species →	Biological Process	phosphatidylinositol-3-phosphate biosynthetic process	Interproscan
GO:0046854 all species →	Biological Process	phosphatidylinositol phosphate biosynthetic process	Interproscan
GO:0048015 all species →	Biological Process	phosphatidylinositol-mediated signaling	Interproscan
GO:0052742 all species →	Molecular Function	phosphatidylinositol kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00914	PIK3C3, VPS34; phosphatidylinositol 3-kinase	EC:2.7.1.137	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.