Detailed information of g33.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MBX7146670.1, ABC transporter substrate-binding protein [Alphaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P23847Dipeptide-binding protein OS=Escherichia coli (strain K12) OX=83333 GN=dppA PE=1 SV=1
A5VU91Putative ABC transporter peptide-binding protein BOV_A0352 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) OX=444178 GN=BOV_A0352 PE=3 SV=1
Q577J8Putative ABC transporter peptide-binding protein BruAb2_0792 OS=Brucella abortus biovar 1 (strain 9-941) OX=262698 GN=BruAb2_0792 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE1|ThiF|ThiF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00102Y_phosphataseProtein-tyrosine phosphataseDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF16177ACAS_NAcetyl-coenzyme A synthetase N-terminusFamilyInterproscan
PF13193AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan
PF00501AMP-bindingAMP-binding enzymeFamilyInterproscan
PF00899ThiFThiF familyDomainInterproscan
PF10268Tmemb_161ABPredicted transmembrane protein 161ABFamilyInterproscan
PF12576DUF3754Protein of unknown function (DUF3754)FamilyInterproscan
PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 MiddleDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016130Active_siteProtein-tyrosine phosphatase, active siteInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR003595DomainProtein-tyrosine phosphatase, catalyticInterproscan
IPR000242DomainTyrosine-specific protein phosphatase, PTPase domainInterproscan
IPR000387DomainTyrosine-specific protein phosphatases domainInterproscan
IPR047170FamilyTyrosine-protein phosphatase non-receptor type 12/18/22Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002589DomainMacro domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR043472Homologous_superfamilyMacro domain-likeInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR031053FamilyChromodomain-helicase-DNA-binding protein 1-likeInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR045851Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR032387DomainAcetyl-coenzyme A synthetase, N-terminal domainInterproscan
IPR020845Conserved_siteAMP-binding, conserved siteInterproscan
IPR025110DomainAMP-binding enzyme, C-terminal domainInterproscan
IPR000873DomainAMP-dependent synthetase/ligase domainInterproscan
IPR042099Homologous_superfamilyANL, N-terminal domainInterproscan
IPR000594DomainTHIF-type NAD/FAD binding foldInterproscan
IPR014929DomainE2 bindingInterproscan
IPR030468DomainNEDD8-activating enzyme E1 catalytic subunit, N-terminal domainInterproscan
IPR037078Homologous_superfamilyNEDD8-activating enzyme E1 catalytic subunit, C-terminalInterproscan
IPR045886FamilyThiF/MoeB/HesA familyInterproscan
IPR019395FamilyTransmembrane protein 161A/BInterproscan
IPR023318Homologous_superfamilyUbiquitin activating enzyme, alpha domain superfamilyInterproscan
IPR033127Active_siteUbiquitin-activating enzyme E1, Cys active siteInterproscan
IPR035985Homologous_superfamilyUbiquitin-activating enzymeInterproscan
IPR022227FamilyProtein of unknown function DUF3754Interproscan
IPR039424FamilySolute-binding protein family 5Interproscan
IPR030678FamilyPeptide/nickel binding protein, MppA-typeInterproscan
IPR000914DomainSolute-binding protein family 5 domainInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45983TYROSINE PHOSPHATSE N18, PUTATIVE-RELATEDInterproscan
PTHR47157CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKEInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24095ACETYL-COENZYME A SYNTHETASEInterproscan
PTHR10953UBIQUITIN-ACTIVATING ENZYME E1Interproscan
PTHR16095TRANSMEMBRANE PROTEIN 143 FAMILY MEMBERInterproscan
PTHR30290PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTERInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016311Biological ProcessdephosphorylationInterproscan
GO:0004725Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0004726Molecular Functionnon-membrane spanning protein tyrosine phosphatase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0035335Biological Processpeptidyl-tyrosine dephosphorylationInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0003987Molecular Functionacetate-CoA ligase activityInterproscan
GO:0006085Biological Processacetyl-CoA biosynthetic processInterproscan
GO:0019781Molecular FunctionNEDD8 activating enzyme activityInterproscan
GO:0045116Biological Processprotein neddylationInterproscan
GO:0032446Biological Processprotein modification by small protein conjugationInterproscan
GO:0008641Molecular Functionubiquitin-like modifier activating enzyme activityInterproscan
GO:0015833Biological Processpeptide transportInterproscan
GO:0030288Cellular Componentouter membrane-bounded periplasmic spaceInterproscan
GO:1904680Molecular Functionpeptide transmembrane transporter activityInterproscan
GO:0043190Cellular ComponentATP-binding cassette (ABC) transporter complexInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01895ACSS1_2, acs; acetyl-CoA synthetaseEC:6.2.1.1
Transportersko02000deepkoala
Ubiquitin systemko04121deepkoala
Chromosome and associated proteinsko03036deepkoala
Lipid biosynthesis proteinsko01004deepkoala

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