Detailed information of g33033.t1 in Montipora capitata

Genomic Location: xfSc0006709:119...5246
NR annotation: XP_015768355.1, PREDICTED: DNA topoisomerase 2-alpha-like isoform X2 [Acropora digitifera]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O42131DNA topoisomerase 2-beta OS=Gallus gallus OX=9031 GN=TOP2B PE=2 SV=1
Q64511DNA topoisomerase 2-beta OS=Mus musculus OX=10090 GN=Top2b PE=1 SV=2
Q02880DNA topoisomerase 2-beta OS=Homo sapiens OX=9606 GN=TOP2B PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002437 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00521
all species →		DNA_topoisoIVDNA gyrase/topoisomerase IV, subunit AFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002205
all species →		DomainDNA topoisomerase, type IIA, domain AInterproscan
IPR013757
all species →		Homologous_superfamilyDNA topoisomerase, type IIA, alpha-helical domain superfamilyInterproscan
IPR013760
all species →		Homologous_superfamilyDNA topoisomerase, type IIA-like domain superfamilyInterproscan
IPR050634
all species →		FamilyDNA Topoisomerase II EnzymeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10169
all species →		DNA TOPOISOMERASE/GYRASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003918
all species →		Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006265
all species →		Biological ProcessDNA topological changeInterproscan
GO:0000712
all species →		Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000819
all species →		Biological Processsister chromatid segregationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g33033.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP