Detailed information of g333.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: ANK79866.1, hypothetical protein TEF_02960 [Rhizobiales bacterium NRL2]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q29RY7Fibroleukin OS=Bos taurus OX=9913 GN=FGL2 PE=2 SV=1
P06399Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3
P02671Fibrinogen alpha chain OS=Homo sapiens OX=9606 GN=FGA PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF09718Tape_meas_lam_CLambda phage tail tape-measure protein (Tape_meas_lam_C)DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR005343FamilyNucleolar complex protein 2Interproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR006431DomainBacteriophage tail tape measure, C-terminalInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR053076FamilyWW domain-containing proteinInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR039188FamilyATPase family AAA domain-containing protein 3Interproscan
IPR003959DomainATPase, AAA-type, coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12687NUCLEOLAR COMPLEX 2 AND RAD4-RELATEDInterproscan
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan
PTHR47501TRANSPOSASE-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46697FORMIN-BINDING PROTEIN 4Interproscan
PTHR23075PUTATIVE ATP-ASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0030690Cellular ComponentNoc1p-Noc2p complexInterproscan
GO:0030691Cellular ComponentNoc2p-Noc3p complexInterproscan
GO:0042273Biological Processribosomal large subunit biogenesisInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0007005Biological Processmitochondrion organizationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03502umuC; DNA polymerase V-Ubiquitin systemko04121deepkoala
DNA repair and recombination proteinsko03400deepkoala

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