Detailed information of g3343.t2 in Acropora digitifera

Genomic Location: chr2Alt:11595473...11649495
NR annotation: XP_029211745.2, voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X2 [Acropora millepora]
Species abbreviation ADIGI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C9D7C2Voltage-dependent calcium channel type A subunit alpha-1 OS=Apis mellifera OX=7460 GN=CAC PE=2 SV=1
P91645Voltage-dependent calcium channel type A subunit alpha-1 OS=Drosophila melanogaster OX=7227 GN=cac PE=1 SV=3
Q15878Voltage-dependent R-type calcium channel subunit alpha-1E OS=Homo sapiens OX=9606 GN=CACNA1E PE=1 SV=3
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16905
all species →		GPHHVoltage-dependent L-type calcium channel, IQ-associatedFamilyInterproscan
PF00520
all species →		Ion_transIon transport proteinFamilyInterproscan
PF08763
all species →		Ca_chan_IQVoltage gated calcium channel IQ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031649
all species →		DomainVoltage-dependent L-type calcium channel, IQ-associated domainInterproscan
IPR027359
all species →		Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR050599
all species →		FamilyVoltage-dependent calcium channel alpha-1 subunitInterproscan
IPR005446
all species →		FamilyVoltage-dependent calcium channel, L-type, alpha-1 subunitInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR005821
all species →		DomainIon transport domainInterproscan
IPR014873
all species →		DomainVoltage-dependent calcium channel, alpha-1 subunit, IQ domainInterproscan
IPR002077
all species →		FamilyVoltage-dependent calcium channel, alpha-1 subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45628
all species →		VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005891
all species →		Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0008331
all species →		Molecular Functionhigh voltage-gated calcium channel activityInterproscan
GO:0098703
all species →		Biological Processcalcium ion import across plasma membraneInterproscan
GO:0005245
all species →		Molecular Functionvoltage-gated calcium channel activityInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g3343.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP