Detailed information of g337.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCK5274977.1, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase [Alphaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q1RHI5Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=sucB PE=3 SV=1
Q92J43Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=sucB PE=3 SV=1
Q4UKI7Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=sucB PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT
Ubiquitin FamilyE3|E3 activity|RBR

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13847Methyltransf_31Methyltransferase domainDomainInterproscan
PF02223Thymidylate_kinThymidylate kinaseDomainInterproscan
PF03067LPMO_10Lytic polysaccharide mono-oxygenase, cellulose-degradingDomainInterproscan
PF00856SETSET domainFamilyInterproscan
PF01485IBRIBR domain, a half RING-finger domainDomainInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF001982-oxoacid_dh2-oxoacid dehydrogenases acyltransferase (catalytic domain)DomainInterproscan
PF20700MutatorMutator-like transposaseDomainInterproscan
PF00566RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR025714DomainMethyltransferase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR039430DomainThymidylate kinase-like domainInterproscan
IPR018095Conserved_siteThymidylate kinase, conserved siteInterproscan
IPR004302DomainCellulose/chitin-binding protein, N-terminalInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR001214DomainSET domainInterproscan
IPR003616DomainPost-SET domainInterproscan
IPR051516FamilyHistone-lysine N-methyltransferase SETDBInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR002867DomainIBR domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR031127FamilyE3 ubiquitin ligase RBR familyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR000569DomainHECT domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR050409FamilyE3 ubiquitin-protein ligaseInterproscan
IPR006255FamilyDihydrolipoamide succinyltransferaseInterproscan
IPR023213Homologous_superfamilyChloramphenicol acetyltransferase-like domain superfamilyInterproscan
IPR036625Homologous_superfamilyE3-binding domain superfamilyInterproscan
IPR050537Family2-oxoacid dehydrogenaseInterproscan
IPR001078Domain2-oxoacid dehydrogenase acyltransferase, catalytic domainInterproscan
IPR049012DomainMutator-like transposase domainInterproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR050302FamilyRab GTPase-activating TBC domain-containing proteinInterproscan
IPR000195DomainRab-GAP-TBC domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10344THYMIDYLATE KINASEInterproscan
PTHR46024HISTONE-LYSINE N-METHYLTRANSFERASE EGGLESSInterproscan
PTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR11254HECT DOMAIN UBIQUITIN-PROTEIN LIGASEInterproscan
PTHR43416DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATEDInterproscan
PTHR31751SI:CH211-108C17.2-RELATED-RELATEDInterproscan
PTHR47219RAB GTPASE-ACTIVATING PROTEIN 1-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004798Molecular Functionthymidylate kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006233Biological ProcessdTDP biosynthetic processInterproscan
GO:0004550Molecular Functionnucleoside diphosphate kinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006227Biological ProcessdUDP biosynthetic processInterproscan
GO:0006235Biological ProcessdTTP biosynthetic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0010629Biological Processnegative regulation of gene expressionInterproscan
GO:0046974Molecular Functionhistone H3K9 methyltransferase activityInterproscan
GO:0051567Biological Processobsolete histone H3-K9 methylationInterproscan
GO:0070828Biological Processheterochromatin organizationInterproscan
GO:0090309Biological Processobsolete positive regulation of DNA methylation-dependent heterochromatin formationInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032436Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0007030Biological ProcessGolgi organizationInterproscan
GO:0061025Biological Processmembrane fusionInterproscan
GO:0004149Molecular Functiondihydrolipoyllysine-residue succinyltransferase activityInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0045252Cellular Componentoxoglutarate dehydrogenase complexInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20167TBC1D14; TBC1 domain family member 14-Lipoic acid metabolismko00785deepkoala
Membrane traffickingko04131deepkoala

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