Detailed information of g3432.t1 in Acropora digitifera

Genomic Location: chr2Alt:12975003...12982081
NR annotation: XP_029214236.1, vacuolar protein sorting-associated protein 52 homolog [Acropora millepora]
Species Acropora digitifera · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8C754Vacuolar protein sorting-associated protein 52 homolog OS=Mus musculus OX=10090 GN=Vps52 PE=1 SV=1
O55166Vacuolar protein sorting-associated protein 52 homolog OS=Rattus norvegicus OX=10116 GN=Vps52 PE=1 SV=2
Q5TJF0Vacuolar protein sorting-associated protein 52 homolog OS=Canis lupus familiaris OX=9615 GN=VPS52 PE=3 SV=1
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20655
all species →
Vps52_CVps52, C-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048361
all species →
DomainVps52, C-terminalInterproscan
IPR007258
all species →
FamilyVps52Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14190
all species →
SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000938
all species →
Cellular ComponentGARP complexInterproscan
GO:0006896
all species →
Biological ProcessGolgi to vacuole transportInterproscan
GO:0007041
all species →
Biological Processlysosomal transportInterproscan
GO:0019905
all species →
Molecular Functionsyntaxin bindingInterproscan
GO:0032456
all species →
Biological Processendocytic recyclingInterproscan
GO:0042147
all species →
Biological Processretrograde transport, endosome to GolgiInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g3432.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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