Gene detail

Detailed information of g3440.t1 in Montipora capitata

Genomic Location: Sc0000059:562871...564001
NR annotation: XP_015749342.1, PREDICTED: tigger transposable element-derived protein 4-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q17RP2	Tigger transposable element-derived protein 6 OS=Homo sapiens OX=9606 GN=TIGD6 PE=1 SV=2
Q96MW7	Tigger transposable element-derived protein 1 OS=Homo sapiens OX=9606 GN=TIGD1 PE=1 SV=1
P32896	Protein PDC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDC2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan
PF04218	CENP-B_N	CENP-B N-terminal DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan
IPR050863	Family	Centromere and Transposable Element-Derived Protein	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR007889	Domain	DNA binding HTH domain, Psq-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19303	TRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04863	CACNB2; voltage-dependent calcium channel beta-2	-	Ion channels	ko04040	deepkoala