Detailed information of g34613.t1 in Montipora capitata

Genomic Location: xfSc0022405:119...947
NR annotation: XP_044163263.1, replication stress response regulator SDE2-like [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for g34613.t1 in MCAPI (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q07G43Splicing regulator SDE2 OS=Xenopus tropicalis OX=8364 GN=sde2 PE=2 SV=1
Q7T293Splicing regulator SDE2 OS=Danio rerio OX=7955 GN=sde2 PE=2 SV=2
Q6NRI5Splicing regulator SDE2 OS=Xenopus laevis OX=8355 GN=sde2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005684 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13019
all species →
Sde2_N_UbiSilencing defective 2 N-terminal ubiquitin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051421
all species →
FamilyRNA Processing and DNA Damage Response RegulatorInterproscan
IPR024974
all species →
DomainSde2, N-terminal ubiquitin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12786
all species →
SPLICING FACTOR SF3A-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g34613.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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