Gene detail

Detailed information of g34726.t1 in Montipora capitata

Genomic Location: xpSc0028464:400778...423335
NR annotation: CAH3133845.1, unnamed protein product [Porites lobata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A5YKK6	CCR4-NOT transcription complex subunit 1 OS=Homo sapiens OX=9606 GN=CNOT1 PE=1 SV=2
Q6ZQ08	CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=2
A1A5H6	CCR4-NOT transcription complex subunit 1 OS=Danio rerio OX=7955 GN=cnot1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12842	DUF3819	CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819	Domain	Interproscan
PF16415	CNOT1_CAF1_bind	CCR4-NOT transcription complex subunit 1 CAF1-binding domain	Repeat	Interproscan
PF04054	Not1	CCR4-Not complex component, Not1	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024557	Domain	CCR4-NOT transcription complex subunit 1, domain 4	Interproscan
IPR040398	Family	CCR4-NOT transcription complex subunit 1	Interproscan
IPR032191	Domain	CCR4-NOT transcription complex subunit 1, CAF1-binding domain	Interproscan
IPR007196	Domain	CCR4-Not complex component, Not1, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13162	CCR4-NOT TRANSCRIPTION COMPLEX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000288	Biological Process	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	Interproscan
GO:0000932	Cellular Component	P-body	Interproscan
GO:0017148	Biological Process	negative regulation of translation	Interproscan
GO:0030015	Cellular Component	CCR4-NOT core complex	Interproscan
GO:0060090	Molecular Function	molecular adaptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12604	CNOT1, NOT1; CCR4-NOT transcription complex subunit 1	-	Messenger RNA biogenesis	ko03019	deepkoala