Detailed information of g34902.t1 in Montipora capitata

Genomic Location: xpSc0028474:34465...67161
NR annotation: XP_029179484.2, LOW QUALITY PROTEIN: uncharacterized protein LOC114946992 [Acropora millepora]
Species abbreviation MCAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for g34902.t1 in MCAPI (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6N021Methylcytosine dioxygenase TET2 OS=Homo sapiens OX=9606 GN=TET2 PE=1 SV=3
Q8NFU7Methylcytosine dioxygenase TET1 OS=Homo sapiens OX=9606 GN=TET1 PE=1 SV=2
Q3URK3Methylcytosine dioxygenase TET1 OS=Mus musculus OX=10090 GN=Tet1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005310 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02008
all species →		zf-CXXCCXXC zinc finger domainDomainInterproscan
PF12851
all species →		Tet_JBPOxygenase domain of the 2OGFeDO superfamily DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002857
all species →		DomainZinc finger, CXXC-typeInterproscan
IPR024779
all species →		Domain2OGFeDO JBP1/TET, oxygenase domainInterproscan
IPR040175
all species →		FamilyMethylcytosine dioxygenase TET1/2/3Interproscan
IPR046942
all species →		DomainMethylcytosine dioxygenase TET1-3, oxygenase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23358
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006211
all species →		Biological Processobsolete 5-methylcytosine catabolic processInterproscan
GO:0045944
all species →		Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0070579
all species →		Molecular Function5-methylcytosine dioxygenase activityInterproscan
GO:0080111
all species →		Biological Processobsolete DNA demethylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24309TET2_3; methylcytosine dioxygenase TET2/3EC:1.14.11.80
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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