Detailed information of g35.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: MCP4394036.1, hypothetical protein [Alphaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B8ZS00Aldo-keto reductase MLBr01669 OS=Mycobacterium leprae (strain Br4923) OX=561304 GN=MLBr01669 PE=3 SV=1
O69462Aldo-keto reductase ML1669 OS=Mycobacterium leprae (strain TN) OX=272631 GN=ML1669 PE=3 SV=1
B2HIJ9Aldo-keto reductase MMAR_1744 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) OX=216594 GN=MMAR_1744 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF13621Cupin_8Cupin-like domainDomainInterproscan
PF00248Aldo_ket_redAldo/keto reductase familyDomainInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF05602CLPTM1Cleft lip and palate transmembrane protein 1 (CLPTM1)FamilyInterproscan
PF05396Phage_T7_CapsidPhage T7 capsid assembly proteinFamilyInterproscan
PF00318Ribosomal_S2Ribosomal protein S2FamilyInterproscan
PF10545MADF_DNA_bdgAlcohol dehydrogenase transcription factor Myb/SANT-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR020471FamilyAldo-keto reductaseInterproscan
IPR041667DomainCupin-like domain 8Interproscan
IPR023210DomainNADP-dependent oxidoreductase domainInterproscan
IPR003347DomainJmjC domainInterproscan
IPR036812Homologous_superfamilyNADP-dependent oxidoreductase domain superfamilyInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR050125FamilyG-protein coupled receptor opsinsInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR042411FamilyWD repeat-containing protein 27Interproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR008429FamilyCleft lip and palate transmembrane 1Interproscan
IPR008768FamilyCapsid assembly scaffolding protein-likeInterproscan
IPR001865FamilySmall ribosomal subunit protein uS2Interproscan
IPR023591Homologous_superfamilySmall ribosomal subunit protein uS2, flavodoxin-like domain superfamilyInterproscan
IPR018130Conserved_siteSmall ribosomal subunit protein uS2, conserved siteInterproscan
IPR005706FamilySmall ribosomal subunit protein uS2, bacteria/mitochondria/plastidInterproscan
IPR006578DomainMADF domainInterproscan
IPR039353FamilyTranscription factor Adf-1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24012RNA BINDING PROTEINInterproscan
PTHR438272,5-DIKETO-D-GLUCONIC ACID REDUCTASEInterproscan
PTHR24240OPSINInterproscan
PTHR44525WD REPEAT-CONTAINING PROTEIN 27Interproscan
PTHR21347CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATEDInterproscan
PTHR1253430S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLARInterproscan
PTHR12243MADF DOMAIN TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006376Biological ProcessmRNA splice site recognitionInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007602Biological ProcessphototransductionInterproscan
GO:0008020Molecular FunctionG protein-coupled photoreceptor activityInterproscan
GO:0071482Biological Processcellular response to light stimulusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0019069Biological Processviral capsid assemblyInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0005763Cellular Componentmitochondrial small ribosomal subunitInterproscan
GO:0015935Cellular Componentsmall ribosomal subunitInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14842NSA2; ribosome biogenesis protein NSA2-Ribosomeko03011deepkoala
G protein-coupled receptorsko04030deepkoala
Ribosome biogenesisko03009deepkoala

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