Detailed information of g351.t1 in Calvadosia cruxmelitensis

Genomic Location: :...
NR annotation: XP_047128236.1, nck-associated protein 1 homolog [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A7RU46Nck-associated protein 1 homolog OS=Nematostella vectensis OX=45351 GN=napA PE=3 SV=1
P28660Nck-associated protein 1 OS=Mus musculus OX=10090 GN=Nckap1 PE=1 SV=2
P55161Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08336P4Ha_NProlyl 4-Hydroxylase alpha-subunit, N-terminal regionFamilyInterproscan
PF09735Nckap1Nck-associated protein 1FamilyInterproscan
PF16801MSL1_dimerDimerisation domain of Male-specific-Lethal 1Coiled-coilInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan
PF01471PG_binding_1Putative peptidoglycan binding domainDomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037692FamilyCentrosomal protein of 70kDaInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013547DomainProlyl 4-hydroxylase alpha-subunit, N-terminalInterproscan
IPR019137FamilyNck-associated protein 1Interproscan
IPR031840DomainProtein male-specific lethal-1, dimerisation domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR002477DomainPeptidoglycan binding-likeInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR051732FamilyUpstream Stimulatory FactorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14594CENTROSOMAL PROTEIN OF 70 KDAInterproscan
PTHR12093NCK-ASSOCIATED PROTEIN 1Interproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR10201MATRIX METALLOPROTEINASEInterproscan
PTHR19963CCHC-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46117FI24210P1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005813Cellular ComponentcentrosomeInterproscan
GO:0043015Molecular Functiongamma-tubulin bindingInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0070507Biological Processregulation of microtubule cytoskeleton organizationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004656Molecular Functionprocollagen-proline 4-dioxygenase activityInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0000902Biological Processcell morphogenesisInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0030031Biological Processcell projection assemblyInterproscan
GO:0030866Biological Processcortical actin cytoskeleton organizationInterproscan
GO:0031209Cellular ComponentSCAR complexInterproscan
GO:0048812Biological Processneuron projection morphogenesisInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09106USF; upstream stimulatory factor-Transcription factorsko03000deepkoala

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