Detailed information of g3514.t1.1 in Haliclystus octoradiatus

Genomic Location: :...
NR annotation: AHX03094.1, optix, partial [Aurelia sp. 1 NN-2010a]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O73916Homeobox protein SIX3 OS=Oryzias latipes OX=8090 GN=six3 PE=1 SV=1
O42406Homeobox protein SIX3 OS=Gallus gallus OX=9031 GN=SIX3 PE=1 SV=2
O93307Homeobox protein SIX6 OS=Gallus gallus OX=9031 GN=SIX6 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16878SIX1_SDTranscriptional regulator, SIX1, N-terminal SD domainDomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR031701DomainHomeobox protein SIX1, N-terminal SD domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10390HOMEOBOX PROTEIN SIXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

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