Detailed information of g35239.t1 in Montipora capitata

Genomic Location: xpSc0028505:31973...41057
NR annotation: XP_015753527.1, PREDICTED: uncharacterized protein LOC107333257 [Acropora digitifera]
Species Montipora capitata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for g35239.t1 in MCAPI (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96N96Spermatogenesis-associated protein 13 OS=Homo sapiens OX=9606 GN=SPATA13 PE=1 SV=1
Q9NR80Rho guanine nucleotide exchange factor 4 OS=Homo sapiens OX=9606 GN=ARHGEF4 PE=1 SV=3
Q5DU57Spermatogenesis-associated protein 13 OS=Mus musculus OX=10090 GN=Spata13 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003864 (this species only)
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018
all species →		SH3_1SH3 domainDomainInterproscan
PF00621
all species →		RhoGEFRhoGEF domainDomainInterproscan
PF00169
all species →		PHPH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035899
all species →		Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR001452
all species →		DomainSH3 domainInterproscan
IPR001849
all species →		DomainPleckstrin homology domainInterproscan
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR000219
all species →		DomainDbl homology (DH) domainInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR053086
all species →		FamilyRhoGEF domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45834
all species →		RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 9-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005085
all species →		Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for g35239.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP